Non-Coding RNA Search

Ss1.1-rcbr0_003572.5

Sequence:


               
               ACGACCCCTGCCCAAGGAAGAAAGCAAAGGACGGACAGCGGTGGAGAAGCTGGCCCTGGG
GTCGGAGCCTGCGAGCGGCAGCATGGAGACCCAGCCTGGCTCGGTCCCCGCCCACACGAG
AGCATATCCCATCCGCCCGACGTCACCGCCATGGAACAACTAGAGCACAATTATTTTAAC
AGTACTTGTTCATAGGTTGGCTTGCTCTTTCTGTAATTAGGAGATTCGGCATTTTCAGGG
GCTGTACCACGTGCTGCTGTCGCTATGCTAATGGTTAACCTTATGGAATTAATTCGTATT
TTTCTATGGTTTCTACCTGACACTGTCTCTGGTCATGGGGTTGTTTTGCTGTGCTTTGTT
TTTTTTTGTTTGTTTGTTTTTCTGTTTTTTGCTTTGTTTTGCTTTGTTTTGTTCAGTCCG
TCTGTAGGCTTTGCATTGGTTTGGATAAAGAAACAGATCAGAAGTCACTAACTGCTCTCT
CCCCAAGGGCATCTTTAGACTTTGTGGAGACATTTCAAAACACCGAGGGGGGGAAAAACA
TCCAGTACTATTCACTAAAACATTCATAAATAAAACCTCTCTCCCACAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACGACCCCTGCCCAAGGAAGAAAGCAAAGGACGGACAGCGGTGGAGAAGCTGGCCCTGGG
GTCGGAGCCTGCGAGCGGCAGCATGGAGACCCAGCCTGGCTCGGTCCCCGCCCACACGAG
AGCATATCCCATCCGCCCGACGTCACCGCCATGGAACAACTAGAGCACAATTATTTTAAC
AGTACTTGTTCATAGGTTGGCTTGCTCTTTCTGTAATTAGGAGATTCGGCATTTTCAGGG
GCTGTACCACGTGCTGCTGTCGCTATGCTAATGGTTAACCTTATGGAATTAATTCGTATT
TTTCTATGGTTTCTACCTGACACTGTCTCTGGTCATGGGGTTGTTTTGCTGTGCTTTGTT
TTTTTTTGTTTGTTTGTTTTTCTGTTTTTTGCTTTGTTTTGCTTTGTTTTGTTCAGTCCG
TCTGTAGGCTTTGCATTGGTTTGGATAAAGAAACAGATCAGAAGTCACTAACTGCTCTCT
CCCCAAGGGCATCTTTAGACTTTGTGGAGACATTTCAAAACACCGAGGGGGGGAAAAACA
TCCAGTACTATTCACTAAAACATTCATAAATAAAACCTCTCTCCCACAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-585, gnl|bosTau2|chr4 (68183570-68183009)
               

               
               6-585, gnl|Hg17|chr7 (154122106-154122695)
               

               
               6-585, gnl|Mm7|chr5 (26758464-26759039)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-585, gnl|bosTau2|chr4 (68183570-68183009)
               

               
               6-585, gnl|Hg17|chr7 (154122106-154122695)
               

               
               6-585, gnl|Mm7|chr5 (26758464-26759039)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cbr (1.0238)
               

               
               fcc (0.197785)
               

               
               fhi (0.169578)
               

               
               hyp (0.142837)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (1.0238)
               

               
               fcc (0.197785)
               

               
               fhi (0.169578)
               

               
               hyp (0.142837)

	6-585, gnl\|bosTau2\|chr4 (68183570-68183009)
	6-585, gnl\|Hg17\|chr7 (154122106-154122695)
	6-585, gnl\|Mm7\|chr5 (26758464-26759039)