Non-Coding RNA Search

Ss1.1-rcbr0_003687.5

Sequence:


               
               CTGCAGGATTCGAATTCCGGCGCAGCTGCAGAGGCTGTTCCGACGCCTGGAGTCCCAGGC
CTCGTGGCTGGACGCCGTGGTGCCCCGTTTGGCCGAAGTTCTACACCTGGAAGACACGCC
CAGCATCCAGATGGAGGTGGGGATGCTGGTGCGGGATTACCCAGACATCAGGCGGAAGCA
CGTGGCAGCCCTCCTGGACATGCGGGGCCTCCGCCGCACCGCCGCCCGCCATGAGATCCT
GGCGGTGGCCCGGGACCTGGAACTGTCGGAGGGGGGCAGCTTGTCACGCCCTCGGGACCG
TGCCTTCTTCGCAGACATCCCTGTGCCCCGGCCGCCCTTCTGCCTCAGCCTCCCTCTCTT
CTTGGGCCGCCTCCCCCTGTCCCGGCTGGCCTGCCTGCCCTGGCCTCGGCCCCCGTCTCC
ATCCCGGGCCCGGGCCCAACGCTGAGACTCTCCAGCCCCGCCTCGGTGTCCCCCACTCTC
TGCTGCTGCTGACCCACCATCCTCCAGACCGCCTGCTGGGGCCCGCAGACCCCTGGGCTG
GAAAGATCCTTAGAGGACGCCTCCCCTACCCCCAAACCTCTAGAAGAGAAACAGACCAGA
AGGCATAAAGACTTTCCCAAGGCCACGAAGCTTGTTCCCAGCACCACCTCCCCAGCCTAG
TGTGCGGTGGGTGGTGTTCTGGAAGGCTCTGCAGAAATATCCCAGCCCCCCCTTTCCCCT
CACCTCAAGGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGATTCGAATTCCGGCGCAGCTGCAGAGGCTGTTCCGACGCCTGGAGTCCCAGGC
CTCGTGGCTGGACGCCGTGGTGCCCCGTTTGGCCGAAGTTCTACACCTGGAAGACACGCC
CAGCATCCAGATGGAGGTGGGGATGCTGGTGCGGGATTACCCAGACATCAGGCGGAAGCA
CGTGGCAGCCCTCCTGGACATGCGGGGCCTCCGCCGCACCGCCGCCCGCCATGAGATCCT
GGCGGTGGCCCGGGACCTGGAACTGTCGGAGGGGGGCAGCTTGTCACGCCCTCGGGACCG
TGCCTTCTTCGCAGACATCCCTGTGCCCCGGCCGCCCTTCTGCCTCAGCCTCCCTCTCTT
CTTGGGCCGCCTCCCCCTGTCCCGGCTGGCCTGCCTGCCCTGGCCTCGGCCCCCGTCTCC
ATCCCGGGCCCGGGCCCAACGCTGAGACTCTCCAGCCCCGCCTCGGTGTCCCCCACTCTC
TGCTGCTGCTGACCCACCATCCTCCAGACCGCCTGCTGGGGCCCGCAGACCCCTGGGCTG
GAAAGATCCTTAGAGGACGCCTCCCCTACCCCCAAACCTCTAGAAGAGAAACAGACCAGA
AGGCATAAAGACTTTCCCAAGGCCACGAAGCTTGTTCCCAGCACCACCTCCCCAGCCTAG
TGTGCGGTGGGTGGTGTTCTGGAAGGCTCTGCAGAAATATCCCAGCCCCCCCTTTCCCCT
CACCTCAAGGTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q96GV2_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q96GV2_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               169-732, gnl|bosTau2|chr18 (38599626-38600213)
               

               
               169-732, gnl|Hg17|chr19 (50408458-50407534)
               

               
               169-732, gnl|Mm7|chr7 (17177328-17177911)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               169-732, gnl|bosTau2|chr18 (38599626-38600213)
               

               
               169-732, gnl|Hg17|chr19 (50408458-50407534)
               

               
               169-732, gnl|Mm7|chr7 (17177328-17177911)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cbr (1.27975)
               

               
               mcp (0.170648)
               

               
               cki (0.165235)
               

               
               cly (0.120642)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (1.27975)
               

               
               mcp (0.170648)
               

               
               cki (0.165235)
               

               
               cly (0.120642)

	169-732, gnl\|bosTau2\|chr18 (38599626-38600213)
	169-732, gnl\|Hg17\|chr19 (50408458-50407534)
	169-732, gnl\|Mm7\|chr7 (17177328-17177911)