Non-Coding RNA Search

Ss1.1-rcbr0_004351.5

Sequence:


               
               ATTCGATTTTTTCATTCTAGCAAGGCACTAATACTAGATCATTTGTAGAACTCCTCTATG
CTCTAAAATTCCATAATTCTATGAATGTAAATCGCATACAAATGCTGAGTCAGATTGGAA
AGGCATCATTATTAGGAGATGGAGATATGTGCCCTGGTTGACTCACCTCAAGCAGGCAGT
CCACTGCTGTTTGCCATTGAGTTGCATCACTGAGTAATTAGAATTCTAAGTGACATTATA
CCCATGTCATTTTCAATGTATTTTTACTTATTTTTGAAATTTAATTTTATTGGAGCATAT
TTGATTTACAGTGTTGTATTAGTTTCAGGTGTACAGCAAAGTGAATCAATTATACCTATA
AACATATCCATTCTTTTTTCCTATATAGGTTATTACAAACAATTGAGTAGGTTTTCCTGG
CTGTACAGTAGGTTCTTGTTAAATAGATTTTTAAAACTCTGCCTTGGAGTACATATTCCC
TGTTAATCTATAGGATTGTTATAATTGACCTTATAATCATACACTGAGGACAATAATTGA
TGCTGTTATTTCTCTTCTTTCAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCGATTTTTTCATTCTAGCAAGGCACTAATACTAGATCATTTGTAGAACTCCTCTATG
CTCTAAAATTCCATAATTCTATGAATGTAAATCGCATACAAATGCTGAGTCAGATTGGAA
AGGCATCATTATTAGGAGATGGAGATATGTGCCCTGGTTGACTCACCTCAAGCAGGCAGT
CCACTGCTGTTTGCCATTGAGTTGCATCACTGAGTAATTAGAATTCTAAGTGACATTATA
CCCATGTCATTTTCAATGTATTTTTACTTATTTTTGAAATTTAATTTTATTGGAGCATAT
TTGATTTACAGTGTTGTATTAGTTTCAGGTGTACAGCAAAGTGAATCAATTATACCTATA
AACATATCCATTCTTTTTTCCTATATAGGTTATTACAAACAATTGAGTAGGTTTTCCTGG
CTGTACAGTAGGTTCTTGTTAAATAGATTTTTAAAACTCTGCCTTGGAGTACATATTCCC
TGTTAATCTATAGGATTGTTATAATTGACCTTATAATCATACACTGAGGACAATAATTGA
TGCTGTTATTTCTCTTCTTTCAAC

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               8-266, gnl|bosTau2|chr7 (64732061-64731796)
               

               
               8-266, gnl|Hg17|chr5 (102279746-102280003)
               

               
               8-266, gnl|Mm7|chr1 (97785077-97784822)
               


               
               271-452, gnl|bosTau2|chr10 (11060342-11060527)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-266, gnl|bosTau2|chr7 (64732061-64731796)
               

               
               8-266, gnl|Hg17|chr5 (102279746-102280003)
               

               
               8-266, gnl|Mm7|chr1 (97785077-97784822)
               


               
               271-452, gnl|bosTau2|chr10 (11060342-11060527)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cbr (1.53571)
               

               
               ctl (0.153069)
               

               
               kid (0.129735)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (1.53571)
               

               
               ctl (0.153069)
               

               
               kid (0.129735)

	8-266, gnl\|bosTau2\|chr7 (64732061-64731796)
	8-266, gnl\|Hg17\|chr5 (102279746-102280003)
	8-266, gnl\|Mm7\|chr1 (97785077-97784822)

	271-452, gnl\|bosTau2\|chr10 (11060342-11060527)