Non-Coding RNA Search

Ss1.1-rcbr0_006205.5

Sequence:


               
               TTCGAATTCGAATTCGCGGAGAGCGGTGGAGAAGCGGGCCATCCCGAGGAATATCGCCGA
TCAGGTCCGCTTGGAGCAAGTCATGGCCGGGGCGAGCCTCAGCGAAATCCTCTGGTGTAG
GCTGAGGGAGCTGAAAGATCAGGGGCCGCCTCCCAGCTTCCTGGAGTTGATGAAGGTGAT
CCGCGAGGAAGAAGAGGAAGAGGCCGCCTTCGAAAACGAGAATATTGAAGAGCCGGATGA
AGGGGATGGCTATGGCCACTGGGATCTTGAGGCGGATGAGTAAAGCCCATCCCAGAGGGG
GACCCACAGCCGGCAGGGTAGGGCCTCTGCCTTACCAGGCTAAGACCTTTTCAGATATTT
TTTCTCCTTTAATGTATGCATTTGAAATGACAGCATTTGAGCCAGATCTTGATTCTTCCT
TCCTTCCTTCCTTGATTCTTCTTTCTAAGAAAACATATCTGAGTGTTTCTGGGCCCCTAC
ATAGATTTTAACAGACTGGCATTTACCAACAGGCTCTTCTTGGTTTTCAGGTTGACTTAT
TTTGTGCAGATGTTGGAAGAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCGAATTCGAATTCGCGGAGAGCGGTGGAGAAGCGGGCCATCCCGAGGAATATCGCCGA
TCAGGTCCGCTTGGAGCAAGTCATGGCCGGGGCGAGCCTCAGCGAAATCCTCTGGTGTAG
GCTGAGGGAGCTGAAAGATCAGGGGCCGCCTCCCAGCTTCCTGGAGTTGATGAAGGTGAT
CCGCGAGGAAGAAGAGGAAGAGGCCGCCTTCGAAAACGAGAATATTGAAGAGCCGGATGA
AGGGGATGGCTATGGCCACTGGGATCTTGAGGCGGATGAGTAAAGCCCATCCCAGAGGGG
GACCCACAGCCGGCAGGGTAGGGCCTCTGCCTTACCAGGCTAAGACCTTTTCAGATATTT
TTTCTCCTTTAATGTATGCATTTGAAATGACAGCATTTGAGCCAGATCTTGATTCTTCCT
TCCTTCCTTCCTTGATTCTTCTTTCTAAGAAAACATATCTGAGTGTTTCTGGGCCCCTAC
ATAGATTTTAACAGACTGGCATTTACCAACAGGCTCTTCTTGGTTTTCAGGTTGACTTAT
TTTGTGCAGATGTTGGAAGAAAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|6179736|gb|AAF05625.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|6179736|gb|AAF05625.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-433, gnl|bosTau2|chr8 (39606637-39607054)
               

               
               16-433, gnl|Hg17|chr8 (26421361-26420874)
               

               
               16-433, gnl|Mm7|chr14 (61777844-61778265)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-433, gnl|bosTau2|chr8 (39606637-39607054)
               

               
               16-433, gnl|Hg17|chr8 (26421361-26420874)
               

               
               16-433, gnl|Mm7|chr14 (61777844-61778265)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbr (4.99104)
               

               
               fbs (0.175346)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (4.99104)
               

               
               fbs (0.175346)

	16-433, gnl\|bosTau2\|chr8 (39606637-39607054)
	16-433, gnl\|Hg17\|chr8 (26421361-26420874)
	16-433, gnl\|Mm7\|chr14 (61777844-61778265)