Non-Coding RNA Search

Ss1.1-rcbr0_008462.5

Sequence:


               
               TCGCCTGGGCAACGACTTCCACACCAACAAGCGCGTGTGCGAGGAGATGGCCATTAGTCC
CAGCAAGAAGCTCCGCAACAAGATCGCAGGCTATGTCACACATCTGATGAAGCGGATTCA
GAGAGGACCAGTGAGGGGTATCTCCATTAAGCTGCAGGAGGAGGAGAGAGAGAGGAGAGA
CAACTACGTGCCCGAGGTCTCAGCCCGGGATCAGGAGATCATGGAAGTAGATCCTGACAC
TAAGGAGATGCTGAAACTCTGGGACTTGGGCAGTCTGTCCAACCTGCAAGTCACTCAGCC
TACAGTGGGGATGAATTTCAAAACACCACGTGGAGCCGTTGGAGTCTTTCTGCTATGCTG
TAATATTTGGAATAAACCTCAGTCAACAACAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGCCTGGGCAACGACTTCCACACCAACAAGCGCGTGTGCGAGGAGATGGCCATTAGTCC
CAGCAAGAAGCTCCGCAACAAGATCGCAGGCTATGTCACACATCTGATGAAGCGGATTCA
GAGAGGACCAGTGAGGGGTATCTCCATTAAGCTGCAGGAGGAGGAGAGAGAGAGGAGAGA
CAACTACGTGCCCGAGGTCTCAGCCCGGGATCAGGAGATCATGGAAGTAGATCCTGACAC
TAAGGAGATGCTGAAACTCTGGGACTTGGGCAGTCTGTCCAACCTGCAAGTCACTCAGCC
TACAGTGGGGATGAATTTCAAAACACCACGTGGAGCCGTTGGAGTCTTTCTGCTATGCTG
TAATATTTGGAATAAACCTCAGTCAACAACAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|48675931|ref|NP_001001634.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|48675931|ref|NP_001001634.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-398, gnl|bosTau2|chr18 (38868299-38868682)
               

               
               3-398, gnl|Hg17|chr22 (30760097-30760496)
               

               
               3-398, gnl|Mm7|chr17 (28587220-28586828)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-398, gnl|bosTau2|chr18 (38868299-38868682)
               

               
               3-398, gnl|Hg17|chr22 (30760097-30760496)
               

               
               3-398, gnl|Mm7|chr17 (28587220-28586828)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cbr (0.255951)
               

               
               nco (0.161734)
               

               
               jca (0.11396)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (0.255951)
               

               
               nco (0.161734)
               

               
               jca (0.11396)

	3-398, gnl\|bosTau2\|chr18 (38868299-38868682)
	3-398, gnl\|Hg17\|chr22 (30760097-30760496)
	3-398, gnl\|Mm7\|chr17 (28587220-28586828)