Ss1.1-rcbr0_008944.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGTTGCTACTGATGCAGTTTTCTGTACCCCTGATGCGCGGGAAGGGAGTGGAAATGAGG GTCGTGTTACCCAGCTGGCTGGGTAACAGCAGATGTCGGGATAGTCTTTCCCTTTTGCAT TTTCACATACTTACTGCATTGTTTTTCAACGGACCAATCACCAGAGACTAATTATTGGTC CGTTGAAAAACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGTTGCTACTGATGCAGTTTTCTGTACCCCTGATGCGCGGGAAGGGAGTGGAAATGAGG GTCGTGTTACCCAGCTGGCTGGGTAACAGCAGATGTCGGGATAGTCTTTCCCTTTTGCAT TTTCACATACTTACTGCATTGTTTTTCAACGGACCAATCACCAGAGACTAATTATTGGTC CGTTGAAAAACA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 2-177, + strand, RNAz p=0.987409 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 2-177, + strand, RNAz p=0.987409 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 40-112, + strand, RNAmicro p=0.904187 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of NM_144595, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 2-177, gnl|bosTau2|chr5 (7598652-7598477) | |
| 2-177, gnl|Hg17|chr13 (77235345-77235520) | |
| 2-177, gnl|Mm7|chr14 (98136291-98136460) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-177, gnl|bosTau2|chr5 (7598652-7598477) | |
| 2-177, gnl|Hg17|chr13 (77235345-77235520) | |
| 2-177, gnl|Mm7|chr14 (98136291-98136460) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbr (0.511902) | |
| hyp (0.142837) |