Non-Coding RNA Search

Ss1.1-rcbr0_009510.5

Sequence:


               
               GATAACACTTTAAATCCAATGACAAATTTATAAAAGGGATCAGATGAAAATATCACATAA
TCAACTCACAGATATACTGATATTTACTTAACATAAGGCCCGAAATTGTGTCAAGAACAT
TACAGAACAGGGCGTTAAGAGCTTATTTTAACTTTACATTAATATGTGATAAACTAACAC
AATTCATTGTCAAAGGAAGACAAATACAGAAAAATAGAAAATATGATTTGATGTTATACT
TTACTCAGAATCTCATTATTTCTTATTATGTCATCGTTTAAGAATGATTATTATTTCATT
CCATACAAAAGAATACTAGTTGGACTTATCTGTTGGACAAGGAGAACTAAAGTTAAGATT
ACAAAATTTTAAATTTGGATACACTATAGCTTATGTTCCATTTAATTATGGACAGTAACA
CTGCATGGCTAGTCAGTAAAAGTACAGAATGTGTCACAGGCTGTTGACTTACAAGGGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATAACACTTTAAATCCAATGACAAATTTATAAAAGGGATCAGATGAAAATATCACATAA
TCAACTCACAGATATACTGATATTTACTTAACATAAGGCCCGAAATTGTGTCAAGAACAT
TACAGAACAGGGCGTTAAGAGCTTATTTTAACTTTACATTAATATGTGATAAACTAACAC
AATTCATTGTCAAAGGAAGACAAATACAGAAAAATAGAAAATATGATTTGATGTTATACT
TTACTCAGAATCTCATTATTTCTTATTATGTCATCGTTTAAGAATGATTATTATTTCATT
CCATACAAAAGAATACTAGTTGGACTTATCTGTTGGACAAGGAGAACTAAAGTTAAGATT
ACAAAATTTTAAATTTGGATACACTATAGCTTATGTTCCATTTAATTATGGACAGTAACA
CTGCATGGCTAGTCAGTAAAAGTACAGAATGTGTCACAGGCTGTTGACTTACAAGGGAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-480, gnl|bosTau2|chr3 (30040119-30040596)
               

               
               1-480, gnl|Hg17|chr1 (110908268-110908711)
               

               
               1-480, gnl|Mm7|chr3 (106872568-106872129)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr3 (30040119-30040596)
               

               
               1-480, gnl|Hg17|chr1 (110908268-110908711)
               

               
               1-480, gnl|Mm7|chr3 (106872568-106872129)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cbr (0.639877)
               

               
               fco (0.157208)
               

               
               ste (0.135208)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (0.639877)
               

               
               fco (0.157208)
               

               
               ste (0.135208)

	1-480, gnl\|bosTau2\|chr3 (30040119-30040596)
	1-480, gnl\|Hg17\|chr1 (110908268-110908711)
	1-480, gnl\|Mm7\|chr3 (106872568-106872129)