Non-Coding RNA Search

Ss1.1-rcbr0_012395.5

Sequence:


               
               GGAGGCAGCAGATTGCTCATCTCGCAGGGCCTGTGTCCCCTGGGTGCTGCTGAGGATGGG
GAGAGGGGAGGTTTCCGGGCGTACCTGGCCTGGGGAGTGTCAGTGCCTCACCTGCACACG
GTCAGGTCGGGGAGGCGTCTCTGAGCTGCCCAGAGCTTCTCTGCAAGAGCGAAGGTGTTA
AGCCCGCGCCTGCAGCCTGCTAGCGTGCTCCCTCCTACACCCCAGGGCCCAGCCTGCTTG
ACCCCCTTGGAGGTTTGTCTTTTCCCGTCTGAAGTAGCCCTCGAAGACTGTCGGTCATCA
GGGCAGTGACCTTCCCTCACAGACTCAGAACCAGCTAATGAGCTCTTCTTCGCCTGCAGC
ATCCGGTCCAGGGAATTTCTTTTTCCAGTTTGGCTAATGAAACCATCCAGAAACCCAGAA
AATGCAGACTCGCTCAGTGTAACCTCGAATGTGGACACGATTCACCTCCTCCCTTCATCA
TGTCTCCACGTCTTTAGAGCAGTTTCGTTTTCTCAGTCGGATACCCTGTGTCTGTGTGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGGCAGCAGATTGCTCATCTCGCAGGGCCTGTGTCCCCTGGGTGCTGCTGAGGATGGG
GAGAGGGGAGGTTTCCGGGCGTACCTGGCCTGGGGAGTGTCAGTGCCTCACCTGCACACG
GTCAGGTCGGGGAGGCGTCTCTGAGCTGCCCAGAGCTTCTCTGCAAGAGCGAAGGTGTTA
AGCCCGCGCCTGCAGCCTGCTAGCGTGCTCCCTCCTACACCCCAGGGCCCAGCCTGCTTG
ACCCCCTTGGAGGTTTGTCTTTTCCCGTCTGAAGTAGCCCTCGAAGACTGTCGGTCATCA
GGGCAGTGACCTTCCCTCACAGACTCAGAACCAGCTAATGAGCTCTTCTTCGCCTGCAGC
ATCCGGTCCAGGGAATTTCTTTTTCCAGTTTGGCTAATGAAACCATCCAGAAACCCAGAA
AATGCAGACTCGCTCAGTGTAACCTCGAATGTGGACACGATTCACCTCCTCCCTTCATCA
TGTCTCCACGTCTTTAGAGCAGTTTCGTTTTCTCAGTCGGATACCCTGTGTCTGTGTGAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-540, gnl|bosTau2|chr23 (18078-18621)
               

               
               1-540, gnl|Hg17|chr17 (37382707-37382130)
               

               
               1-540, gnl|Mm7|chr11 (100692544-100691997)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-540, gnl|bosTau2|chr23 (18078-18621)
               

               
               1-540, gnl|Hg17|chr17 (37382707-37382130)
               

               
               1-540, gnl|Mm7|chr11 (100692544-100691997)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbr (1.0238)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbr (1.0238)

	1-540, gnl\|bosTau2\|chr23 (18078-18621)
	1-540, gnl\|Hg17\|chr17 (37382707-37382130)
	1-540, gnl\|Mm7\|chr11 (100692544-100691997)