Ss1.1-rcbr0_013458.5
|
AGATGCCTCTTCTCCCGGCCGTGGCCCCTCAGGGTCTTAGTGACGGTGGGCTACAACCAG
ATTTTTGTCCTGCTCCCCTCCCCACACCCCCTAGACCCCTCGTCATCGGGTCCTGCTGGG
CCTGCCCAGATGGCTGCCCTGTCCCCCTGAGTCCCAGGCCCTGCCCCACCCCAGGCCCCG
TGGCCAGTCTGGGGGCTGCCACCCGGCCTGTCGCCTCTCTTCTTGCACCTCTTCCCATCA
CGGCATCCCCACGAGCCACCTCCCTCCACAGAAAGCCAAGCCGCAGGTCGGCCTGTCCTC
GACGCACTGGCAGCGAGCGTCGGCTGAAGAACCGGATGGAAGAGGCGGGAGAGTCACCAC
GGACCGGCGTTCCTTCAGGTCGGTCGCCTGGCGTCTTCGGGCTGCGACTCCTTCCTGGAT
CGGGCTGAAGCCATCATCTGTGTCCTCCGTCGGAAGGGACCTCAGACATGTGGCTCCTGC
ACCCTCCAGCTCTGAAATCGGCAGGCTAGGATGCAAGTGGCCTTGCTGGGGGGCCCTTCC
AAGGGCCGAGGGACCAGCCTCTCGAACGGGCTCGGCGCTCCAGTGACCTTCGCGTCCCCC
TCCTCCTTGAATTGTCTGGAAAACAGAATGGACAGATTTTCTGTCTTCAAAGTTTCCGGC
TAAACCTCTTCAAAGTTCTTTATTGTTTGGGACTGAGACACTCAGCAGTGCTAATGGGTA
GTTCCTTTTGTATTTGCCCTGAAAGGCCAAAATATTTTTATATCGCTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGATGCCTCTTCTCCCGGCCGTGGCCCCTCAGGGTCTTAGTGACGGTGGGCTACAACCAG
ATTTTTGTCCTGCTCCCCTCCCCACACCCCCTAGACCCCTCGTCATCGGGTCCTGCTGGG
CCTGCCCAGATGGCTGCCCTGTCCCCCTGAGTCCCAGGCCCTGCCCCACCCCAGGCCCCG
TGGCCAGTCTGGGGGCTGCCACCCGGCCTGTCGCCTCTCTTCTTGCACCTCTTCCCATCA
CGGCATCCCCACGAGCCACCTCCCTCCACAGAAAGCCAAGCCGCAGGTCGGCCTGTCCTC
GACGCACTGGCAGCGAGCGTCGGCTGAAGAACCGGATGGAAGAGGCGGGAGAGTCACCAC
GGACCGGCGTTCCTTCAGGTCGGTCGCCTGGCGTCTTCGGGCTGCGACTCCTTCCTGGAT
CGGGCTGAAGCCATCATCTGTGTCCTCCGTCGGAAGGGACCTCAGACATGTGGCTCCTGC
ACCCTCCAGCTCTGAAATCGGCAGGCTAGGATGCAAGTGGCCTTGCTGGGGGGCCCTTCC
AAGGGCCGAGGGACCAGCCTCTCGAACGGGCTCGGCGCTCCAGTGACCTTCGCGTCCCCC
TCCTCCTTGAATTGTCTGGAAAACAGAATGGACAGATTTTCTGTCTTCAAAGTTTCCGGC
TAAACCTCTTCAAAGTTCTTTATTGTTTGGGACTGAGACACTCAGCAGTGCTAATGGGTA
GTTCCTTTTGTATTTGCCCTGAAAGGCCAAAATATTTTTATATCGCTC
|
|
1-288, gnl|bosTau2|chr21 (45528103-45528399) |
|
1-288, gnl|Hg17|chr14 (100371887-100372167) |
| |
|
544-759, gnl|bosTau2|chr21 (45538975-45539180) |
|
544-759, gnl|canFam2|chr8 (72114993-72115569) |
|
544-759, gnl|dasNov1|scaffold_81357 (2287-1736) |
|
544-759, gnl|hg17|chr14 (100381807-100382380) |
|
544-759, gnl|Hg17|chr14 (100382031-100382240) |
|
544-759, gnl|loxAfr1|scaffold_15889 (4968-4400) |
|
544-759, gnl|mm7|chr12 (107079710-107080272) |
|
544-759, gnl|Mm7|chr12 (107079924-107080132) |
|
544-759, gnl|monDom2|scaffold_6 (83090627-83091209) |
|
544-759, gnl|oryCun1|scaffold_189948 (6851-7377) |
|
544-759, gnl|panTro1|chr15 (100939345-100939918) |
|
544-759, gnl|rheMac2|chr7 (164128616-164129187) |
|
544-759, gnl|rn3|chr6 (134141648-134142206) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-288, gnl|bosTau2|chr21 (45528103-45528399) |
|
1-288, gnl|Hg17|chr14 (100371887-100372167) |
| |
|
544-759, gnl|bosTau2|chr21 (45538975-45539180) |
|
544-759, gnl|canFam2|chr8 (72114993-72115569) |
|
544-759, gnl|dasNov1|scaffold_81357 (2287-1736) |
|
544-759, gnl|hg17|chr14 (100381807-100382380) |
|
544-759, gnl|Hg17|chr14 (100382031-100382240) |
|
544-759, gnl|loxAfr1|scaffold_15889 (4968-4400) |
|
544-759, gnl|mm7|chr12 (107079710-107080272) |
|
544-759, gnl|Mm7|chr12 (107079924-107080132) |
|
544-759, gnl|monDom2|scaffold_6 (83090627-83091209) |
|
544-759, gnl|oryCun1|scaffold_189948 (6851-7377) |
|
544-759, gnl|panTro1|chr15 (100939345-100939918) |
|
544-759, gnl|rheMac2|chr7 (164128616-164129187) |
|
544-759, gnl|rn3|chr6 (134141648-134142206) |
|
cbr (7.42257) |
|
fce (0.543183) |
|
fhi (0.508733) |
|
amn (0.417711) |
|
eye (0.341006) |
|
hyp (0.285673) |
|
eru (0.240096) |
|
ece (0.229305) |
|
nms (0.213858) |
|
fcc (0.197785) |
|
fbs (0.175346) |
|
cki (0.165235) |
|
nca (0.136874) |
|
nmm (0.132802) |
|
sug (0.127291) |
|
ese (0.126502) |
|
cbr (7.42257) |
|
fce (0.543183) |
|
fhi (0.508733) |
|
amn (0.417711) |
|
eye (0.341006) |
|
hyp (0.285673) |
|
eru (0.240096) |
|
ece (0.229305) |
|
nms (0.213858) |
|
fcc (0.197785) |
|
fbs (0.175346) |
|
cki (0.165235) |
|
nca (0.136874) |
|
nmm (0.132802) |
|
sug (0.127291) |
|
ese (0.126502) |
