Non-Coding RNA Search

Ss1.1-rcga20b_a13.5

Sequence:


               
               ACCCGCACCTACCGGACCACCGCCCGGAGCCGTATACCCCCGAGGGTAAGGGTGACGATG
GAGGATGAGGACGACGTCGTGGCCGTGGCCGACCGCCTGGCAGGCCCGGCCGCTGCCGAG
CTCCTGGCCTCCACCGTGTCCACAGGTGGCCAGTCGCGTTTGTCGGCAGAAGAGGATGGG
TCTTTGGAAGAAGGGGTTGTGATTTACGCCAGAAGGAATGACACCAGCCTGGAGACTCCC
ATTACGACTTCCAATACAGCTGGGGGGCCAACCCCAATATTTACAGCCAACGGCCAGGAT
CCTGAAATCAAAATGAGTTCAAGCCCATTGCCTTCCACTTGGAAGGCCGCCGCGGACCTG
TCGGCCTCCGACAATACGCTGAACCAGTGGTCAAGAGCAGGGTCCACCCGCAACCGGTGG
CCACCACCCTCACCTACAGCCATGCCAGCTCCTGAGGATCTGCAACTGGTGCTGATGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCGCACCTACCGGACCACCGCCCGGAGCCGTATACCCCCGAGGGTAAGGGTGACGATG
GAGGATGAGGACGACGTCGTGGCCGTGGCCGACCGCCTGGCAGGCCCGGCCGCTGCCGAG
CTCCTGGCCTCCACCGTGTCCACAGGTGGCCAGTCGCGTTTGTCGGCAGAAGAGGATGGG
TCTTTGGAAGAAGGGGTTGTGATTTACGCCAGAAGGAATGACACCAGCCTGGAGACTCCC
ATTACGACTTCCAATACAGCTGGGGGGCCAACCCCAATATTTACAGCCAACGGCCAGGAT
CCTGAAATCAAAATGAGTTCAAGCCCATTGCCTTCCACTTGGAAGGCCGCCGCGGACCTG
TCGGCCTCCGACAATACGCTGAACCAGTGGTCAAGAGCAGGGTCCACCCGCAACCGGTGG
CCACCACCCTCACCTACAGCCATGCCAGCTCCTGAGGATCTGCAACTGGTGCTGATGCCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-480, gnl|bosTau2|chr3 (16522180-16521709)
               

               
               6-480, gnl|Hg17|chr1 (147833546-147834011)
               

               
               6-480, gnl|Mm7|chr3 (95114769-95114289)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-480, gnl|bosTau2|chr3 (16522180-16521709)
               

               
               6-480, gnl|Hg17|chr1 (147833546-147834011)
               

               
               6-480, gnl|Mm7|chr3 (95114769-95114289)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cga (0.279096)
               

               
               tes (0.207814)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               tes (0.207814)

	6-480, gnl\|bosTau2\|chr3 (16522180-16521709)
	6-480, gnl\|Hg17\|chr1 (147833546-147834011)
	6-480, gnl\|Mm7\|chr3 (95114769-95114289)