Ss1.1-rche15_p22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACAACTAATTACCAATTAGGATTAGTTGCTGTTGAAGGCGCTCCTCCAATGAAATCTTC TCTGCTCTCTGATTCGGTGGTTCTTCTGAGCAAATATGACAGCCTTTTCTCCAGGCTTCT TTCCGCTCCTTTTCACGTCCATCCCCAGAGCCACGCTCTCCATCTGCAATCTCTACAACA GAACATTTACAGTTAGTCTCATTCCTGCGAGTATATCTTTGCTATTAAGGTGACATGACT TATTGGGAAGAACGCAGTGTTGCTTTTTGATTGCCGAAGATGCTTAAGCCCAGTTTTTCC AGGTGGGAAAATGTTAGAACAAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACAACTAATTACCAATTAGGATTAGTTGCTGTTGAAGGCGCTCCTCCAATGAAATCTTC TCTGCTCTCTGATTCGGTGGTTCTTCTGAGCAAATATGACAGCCTTTTCTCCAGGCTTCT TTCCGCTCCTTTTCACGTCCATCCCCAGAGCCACGCTCTCCATCTGCAATCTCTACAACA GAACATTTACAGTTAGTCTCATTCCTGCGAGTATATCTTTGCTATTAAGGTGACATGACT TATTGGGAAGAACGCAGTGTTGCTTTTTGATTGCCGAAGATGCTTAAGCCCAGTTTTTCC AGGTGGGAAAATGTTAGAACAAAT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 58-177, - strand, RNAz p=0.565669 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 58-177, - strand, RNAz p=0.565669 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 81-216, - strand, RNAmicro p=0.997892 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 20-324, gnl|bosTau2|chr4 (55472598-55472913) | |
| 20-324, gnl|Hg17|chr7 (136010603-136010295) | |
| 20-324, gnl|Mm7|chr6 (36319544-36319228) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-324, gnl|bosTau2|chr4 (55472598-55472913) | |
| 20-324, gnl|Hg17|chr7 (136010603-136010295) | |
| 20-324, gnl|Mm7|chr6 (36319544-36319228) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| tes (0.207814) | |
| fcc (0.197785) | |
| ski (0.146735) | |
| che (0.136314) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tes (0.207814) | |
| fcc (0.197785) | |
| ski (0.146735) | |
| che (0.136314) |