Ss1.1-rche16_m21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACGTCTCCTCTGCGCACCTTGTGCTCCCCACCTCGCAGATCCGCAGGCTTCTGGAGGCC ATGGGTTGAAGACCAAGGCGAAAAGGAGGAGGAGGCGCCGCACCACACCTCGGAGGCGAT GCCCGATGGCCCCGGAATAAGGGACGCCTCAGGAAAGCTTTCCCGGTACAGACACCCAGT CAGACTATTTGGGCCAAAATCAAAGTGTTATGATTACTTGTATCAAGAAGCAGAAGCTCT TCTGAAAAATTTTCCAATTCAAGCCACAATTTCATTTTATGAAGATTCTGATAGTGAAGA AGAAATTGAGGAGCTGATCTGTGAAAATTAATCTGATTACTTTTGATGACATTCAGAGCT TAGAGGTACAAATTGGATTAGTGTACAAATGTATCATAATCCTTTTAAACTAATTTATTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACGTCTCCTCTGCGCACCTTGTGCTCCCCACCTCGCAGATCCGCAGGCTTCTGGAGGCC ATGGGTTGAAGACCAAGGCGAAAAGGAGGAGGAGGCGCCGCACCACACCTCGGAGGCGAT GCCCGATGGCCCCGGAATAAGGGACGCCTCAGGAAAGCTTTCCCGGTACAGACACCCAGT CAGACTATTTGGGCCAAAATCAAAGTGTTATGATTACTTGTATCAAGAAGCAGAAGCTCT TCTGAAAAATTTTCCAATTCAAGCCACAATTTCATTTTATGAAGATTCTGATAGTGAAGA AGAAATTGAGGAGCTGATCTGTGAAAATTAATCTGATTACTTTTGATGACATTCAGAGCT TAGAGGTACAAATTGGATTAGTGTACAAATGTATCATAATCCTTTTAAACTAATTTATTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 219-338, - strand, RNAz p=0.515632 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 219-338, - strand, RNAz p=0.515632 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 5-121, gnl|bosTau2|chr9 (36671068-36671184) | |
| 5-121, gnl|Hg17|chr6 (84620097-84620214) | |
| 5-121, gnl|Mm7|chr9 (87120416-87120532) | |
| 180-420, gnl|bosTau2|chr9 (36674827-36675068) | |
| 180-420, gnl|Hg17|chr6 (84623676-84623917) | |
| 180-420, gnl|Mm7|chr9 (87124232-87124458) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-121, gnl|bosTau2|chr9 (36671068-36671184) | |
| 5-121, gnl|Hg17|chr6 (84620097-84620214) | |
| 5-121, gnl|Mm7|chr9 (87120416-87120532) | |
| 180-420, gnl|bosTau2|chr9 (36674827-36675068) | |
| 180-420, gnl|Hg17|chr6 (84623676-84623917) | |
| 180-420, gnl|Mm7|chr9 (87124232-87124458) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.136314) | |
| ebs (0.118301) |