Non-Coding RNA Search

Ss1.1-rche17_g15.5

Sequence:


               
               TCAGAATACATATTTAGAACTCTTCCATTTTGTGTATATTTTGTGATTGCTTTATATACT
CTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAGATGTGTGTGTGAAGTTCCTGTCGTGG
CACAGCCATGGGGACGCAGGTTGGATCCCTGGCCTCGCTCCGTGGGTTAAGGATCCGGTG
TTGCTGTGAGCTGTGGTGTAGGTCGCAGATGCAGCTCAGATCCTGCGTGGCTGTGGCTGT
GGTGTAGGCTGGAGGCTACAGCTCCGATTCAACCCCTAGCCTGGGAACCTCCATATGCCT
CAGGTGCAGCCCTTGAACGACAGTAAATAGATTAATTAAAAAGCTGGAATGCGCATAAAA
AAGATCTGAGGGAGAAGCATCAAATGGGGTTTTTCTCTAGGAGATGAGATTGTGGCAGGT
ATTTATCTTCTCAAATTTTTGCATAATTTGCAGATTGTCTACAGTGAACATTCTTTTCAC
TTTTCTCACTCGGTTGAATTATTTAAATTATAATAAGAAATGTTCTTTGTTAAAAATAAA
ATGTACTAACATTACAAAAAAAAATGAAGTAAAAATGAGAAGTCCCTTCTCCTTGGAGGA
TTCTGGGGGCTGAGGGAGGAGCCAGACGTAATTTCAGGGACTGCCTGTTGGTCTAGTTCT
AAATTCTTTCCTCCCATACCTGTATCACCCAGTCAGGAAATAAAGAGCAAGCCCCTCGGT
CCCAGTGGACAGAGCATCTCAGGAACAGTTTAGATTCTTCCTTTCAGATGTTTTTTCTGT
GCAAGTGAAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGAATACATATTTAGAACTCTTCCATTTTGTGTATATTTTGTGATTGCTTTATATACT
CTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAGATGTGTGTGTGAAGTTCCTGTCGTGG
CACAGCCATGGGGACGCAGGTTGGATCCCTGGCCTCGCTCCGTGGGTTAAGGATCCGGTG
TTGCTGTGAGCTGTGGTGTAGGTCGCAGATGCAGCTCAGATCCTGCGTGGCTGTGGCTGT
GGTGTAGGCTGGAGGCTACAGCTCCGATTCAACCCCTAGCCTGGGAACCTCCATATGCCT
CAGGTGCAGCCCTTGAACGACAGTAAATAGATTAATTAAAAAGCTGGAATGCGCATAAAA
AAGATCTGAGGGAGAAGCATCAAATGGGGTTTTTCTCTAGGAGATGAGATTGTGGCAGGT
ATTTATCTTCTCAAATTTTTGCATAATTTGCAGATTGTCTACAGTGAACATTCTTTTCAC
TTTTCTCACTCGGTTGAATTATTTAAATTATAATAAGAAATGTTCTTTGTTAAAAATAAA
ATGTACTAACATTACAAAAAAAAATGAAGTAAAAATGAGAAGTCCCTTCTCCTTGGAGGA
TTCTGGGGGCTGAGGGAGGAGCCAGACGTAATTTCAGGGACTGCCTGTTGGTCTAGTTCT
AAATTCTTTCCTCCCATACCTGTATCACCCAGTCAGGAAATAAAGAGCAAGCCCCTCGGT
CCCAGTGGACAGAGCATCTCAGGAACAGTTTAGATTCTTCCTTTCAGATGTTTTTTCTGT
GCAAGTGAAAAC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               534-773, gnl|bosTau2|chr19 (17275066-17274826)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               534-773, gnl|bosTau2|chr19 (17275066-17274826)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               che (0.272628)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.272628)
               

               
               jej (0.0989218)