Ss1.1-rche20_g23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCAAGACAACGACGGCACACTCAATGATGCTGAACTCAACTTCTTTCAGAGAATTTGTT TCAATACTCCGTTAGCTCCTCAGGCTCTGGAAGATGTCAAGAACGTAGTCAGAAAACACA TAAGTGATGGTGTGGCTGATAGTGGATTGACACTGAAAGGTTTTCTTTTTTTACACACAC TTTTTATCCAGAGAGGGAGACACGAAACTACTTGGACTGTGCTTCGACGATTTGGTTATG ACGACGATCTGGATTTGACTCCTGAATATTTATTTCCCTTGCTAAAAATACCTCCTGATT GCACTACTGAATTAAATCACCATGCATATTTGTTTCTCCAAAGTACTTTTGACAAGCATG ATTTGGATAGAGATTGTGCTTTGTCACCTGATGAGCTTAAAGATTTGTTTAAAGTTTTCC CTTATATACCGTGGGGGCCAGATGTGAATAACACAGTTTGTACAAATGAAAGAGGCTGGA TAACCTACCAGGGCTTCCTCTCCCAGTGGACGCTGACGACCTATTTAGATGTGCAGCGGT GTCTGGAGTATTTGGGTTATCTAGGCTATTCAATATTGACTGAACAAGAGTCTCAAGCTT CAGCCATCACAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCAAGACAACGACGGCACACTCAATGATGCTGAACTCAACTTCTTTCAGAGAATTTGTT TCAATACTCCGTTAGCTCCTCAGGCTCTGGAAGATGTCAAGAACGTAGTCAGAAAACACA TAAGTGATGGTGTGGCTGATAGTGGATTGACACTGAAAGGTTTTCTTTTTTTACACACAC TTTTTATCCAGAGAGGGAGACACGAAACTACTTGGACTGTGCTTCGACGATTTGGTTATG ACGACGATCTGGATTTGACTCCTGAATATTTATTTCCCTTGCTAAAAATACCTCCTGATT GCACTACTGAATTAAATCACCATGCATATTTGTTTCTCCAAAGTACTTTTGACAAGCATG ATTTGGATAGAGATTGTGCTTTGTCACCTGATGAGCTTAAAGATTTGTTTAAAGTTTTCC CTTATATACCGTGGGGGCCAGATGTGAATAACACAGTTTGTACAAATGAAAGAGGCTGGA TAACCTACCAGGGCTTCCTCTCCCAGTGGACGCTGACGACCTATTTAGATGTGCAGCGGT GTCTGGAGTATTTGGGTTATCTAGGCTATTCAATATTGACTGAACAAGAGTCTCAAGCTT CAGCCATCACAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 158-281, gnl|bosTau2|chr19 (12336882-12337005) | |
| 158-281, gnl|canFam2|chr9 (44063522-44063365) | |
| 158-281, gnl|danRer3|chrUn (34572491-34572652) | |
| 158-281, gnl|echTel1|scaffold_316203 (43278-43435) | |
| 158-281, gnl|fr1|chrUn (86766845-86766978) | |
| 158-281, gnl|hg17|chr17 (27545091-27545248) | |
| 158-281, gnl|Hg17|chr17 (27545117-27545240) | |
| 158-281, gnl|loxAfr1|scaffold_112852 (1552-1394) | |
| 158-281, gnl|mm7|chr11 (80324917-80325074) | |
| 158-281, gnl|Mm7|chr11 (80324943-80325066) | |
| 158-281, gnl|monDom2|scaffold_44 (11627824-11627671) | |
| 158-281, gnl|oryCun1|scaffold_186363 (55269-55424) | |
| 158-281, gnl|panTro1|chr19 (31035326-31035483) | |
| 158-281, gnl|rheMac2|chr16 (27537602-27537759) | |
| 158-281, gnl|rn3|chr10 (68477452-68477609) | |
| 158-281, gnl|tetNig1|chrUn_random (53726412-53726281) | |
| 158-281, gnl|xenTro1|scaffold_667 (65470-65336) | |
| 365-512, gnl|bosTau2|chr19 (12339853-12340000) | |
| 365-512, gnl|canFam2|chr9 (44060493-44060332) | |
| 365-512, gnl|danRer3|chrUn (34575251-34575412) | |
| 365-512, gnl|dasNov1|scaffold_1277 (98178-98017) | |
| 365-512, gnl|echTel1|scaffold_316203 (45814-45971) | |
| 365-512, gnl|fr1|chrUn (86767422-86767576) | |
| 365-512, gnl|galGal2|chr18 (6462879-6463037) | |
| 365-512, gnl|hg17|chr17 (27550533-27550694) | |
| 365-512, gnl|Hg17|chr17 (27550536-27550683) | |
| 365-512, gnl|loxAfr1|scaffold_212466 (54-215) | |
| 365-512, gnl|mm7|chr11 (80328238-80328399) | |
| 365-512, gnl|Mm7|chr11 (80328241-80328388) | |
| 365-512, gnl|monDom2|scaffold_44 (11624518-11624357) | |
| 365-512, gnl|oryCun1|scaffold_186363 (58813-58974) | |
| 365-512, gnl|panTro1|chr19 (31040751-31040912) | |
| 365-512, gnl|rheMac2|chr16 (27540805-27540966) | |
| 365-512, gnl|rn3|chr10 (68481473-68481634) | |
| 365-512, gnl|tetNig1|chrUn_random (53725835-53725674) | |
| 365-512, gnl|xenTro1|scaffold_667 (64490-64330) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 158-281, gnl|bosTau2|chr19 (12336882-12337005) | |
| 158-281, gnl|canFam2|chr9 (44063522-44063365) | |
| 158-281, gnl|danRer3|chrUn (34572491-34572652) | |
| 158-281, gnl|echTel1|scaffold_316203 (43278-43435) | |
| 158-281, gnl|fr1|chrUn (86766845-86766978) | |
| 158-281, gnl|hg17|chr17 (27545091-27545248) | |
| 158-281, gnl|Hg17|chr17 (27545117-27545240) | |
| 158-281, gnl|loxAfr1|scaffold_112852 (1552-1394) | |
| 158-281, gnl|mm7|chr11 (80324917-80325074) | |
| 158-281, gnl|Mm7|chr11 (80324943-80325066) | |
| 158-281, gnl|monDom2|scaffold_44 (11627824-11627671) | |
| 158-281, gnl|oryCun1|scaffold_186363 (55269-55424) | |
| 158-281, gnl|panTro1|chr19 (31035326-31035483) | |
| 158-281, gnl|rheMac2|chr16 (27537602-27537759) | |
| 158-281, gnl|rn3|chr10 (68477452-68477609) | |
| 158-281, gnl|tetNig1|chrUn_random (53726412-53726281) | |
| 158-281, gnl|xenTro1|scaffold_667 (65470-65336) | |
| 365-512, gnl|bosTau2|chr19 (12339853-12340000) | |
| 365-512, gnl|canFam2|chr9 (44060493-44060332) | |
| 365-512, gnl|danRer3|chrUn (34575251-34575412) | |
| 365-512, gnl|dasNov1|scaffold_1277 (98178-98017) | |
| 365-512, gnl|echTel1|scaffold_316203 (45814-45971) | |
| 365-512, gnl|fr1|chrUn (86767422-86767576) | |
| 365-512, gnl|galGal2|chr18 (6462879-6463037) | |
| 365-512, gnl|hg17|chr17 (27550533-27550694) | |
| 365-512, gnl|Hg17|chr17 (27550536-27550683) | |
| 365-512, gnl|loxAfr1|scaffold_212466 (54-215) | |
| 365-512, gnl|mm7|chr11 (80328238-80328399) | |
| 365-512, gnl|Mm7|chr11 (80328241-80328388) | |
| 365-512, gnl|monDom2|scaffold_44 (11624518-11624357) | |
| 365-512, gnl|oryCun1|scaffold_186363 (58813-58974) | |
| 365-512, gnl|panTro1|chr19 (31040751-31040912) | |
| 365-512, gnl|rheMac2|chr16 (27540805-27540966) | |
| 365-512, gnl|rn3|chr10 (68481473-68481634) | |
| 365-512, gnl|tetNig1|chrUn_random (53725835-53725674) | |
| 365-512, gnl|xenTro1|scaffold_667 (64490-64330) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.136314) | |
| ldo (0.0970026) |