Non-Coding RNA Search

Ss1.1-rche20_i1.5

Sequence:


               
               CTGGAAATGGACAATCTCTTATGTGCTTGAGTGTCTGTCTTAGGAGGAAACGTCTGCACG
CTTGTAGGGTTAATTTCGGGGGAAATAACTTCGTCCGACTCCTCCCGCTGCCTCGCCCGA
CCGCACCGTCCTTCCCTCCCGCTGTGCCGTCTCTCCGCTTGGCCTCCCCTTCCACCCCCT
CCTCCCCCACCAGCTCCAACCGTCTCGCTGTCCGTCAAAACCTAGAAGTGCTTCTTATAA
CCAAAGTTTCTGCTCTTCGCAAGAAATCAGGGCAAAATGAGGTGACTTGAAGTGAACAAA
AACGCTGAGAATATGTTCCTATGGCAGACCTCTCCACTGAAGGGGAAGCCAGAAGATGCT
GTCGCCAGGCGTCCGCGGCACGAGGTGGCTGTCACGCTAAGGCTGAAGCCTCCTCTGTAT
CTCTTTAGTGTCCATCTGTCCAGCTGTGACTGGACAGGTAAAACAGTATTCCGAGTGCAA
GTATCCAGCCCTTGAAGTCTGTCCCCGGAAAACTGCCTTGTGATTGCCTACCTTCAGATC
TGCACATCTTATAACTTTGTTAAATAGGTTAATCTCTATTTTTGTTTTGCTTCTTTTATT
CCAGGTTCTTGCCAAATATTGCTTGGATCTTTATAGGTAAAACTGTTACACATCTAACTC
CTTATCCCCCCCCCAGAAAGATTTAAAAATGAGTTATGTATCTAGTGTTTTCTCAGCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAAATGGACAATCTCTTATGTGCTTGAGTGTCTGTCTTAGGAGGAAACGTCTGCACG
CTTGTAGGGTTAATTTCGGGGGAAATAACTTCGTCCGACTCCTCCCGCTGCCTCGCCCGA
CCGCACCGTCCTTCCCTCCCGCTGTGCCGTCTCTCCGCTTGGCCTCCCCTTCCACCCCCT
CCTCCCCCACCAGCTCCAACCGTCTCGCTGTCCGTCAAAACCTAGAAGTGCTTCTTATAA
CCAAAGTTTCTGCTCTTCGCAAGAAATCAGGGCAAAATGAGGTGACTTGAAGTGAACAAA
AACGCTGAGAATATGTTCCTATGGCAGACCTCTCCACTGAAGGGGAAGCCAGAAGATGCT
GTCGCCAGGCGTCCGCGGCACGAGGTGGCTGTCACGCTAAGGCTGAAGCCTCCTCTGTAT
CTCTTTAGTGTCCATCTGTCCAGCTGTGACTGGACAGGTAAAACAGTATTCCGAGTGCAA
GTATCCAGCCCTTGAAGTCTGTCCCCGGAAAACTGCCTTGTGATTGCCTACCTTCAGATC
TGCACATCTTATAACTTTGTTAAATAGGTTAATCTCTATTTTTGTTTTGCTTCTTTTATT
CCAGGTTCTTGCCAAATATTGCTTGGATCTTTATAGGTAAAACTGTTACACATCTAACTC
CTTATCCCCCCCCCAGAAAGATTTAAAAATGAGTTATGTATCTAGTGTTTTCTCAGCTAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-720, gnl|bosTau2|chr13 (20588123-20587396)
               

               
               1-720, gnl|Hg17|chr10 (18869939-18871170)
               

               
               1-720, gnl|Mm7|chr2 (14936743-14937474)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-720, gnl|bosTau2|chr13 (20588123-20587396)
               

               
               1-720, gnl|Hg17|chr10 (18869939-18871170)
               

               
               1-720, gnl|Mm7|chr2 (14936743-14937474)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               nmm (0.132802)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               nmm (0.132802)

	1-720, gnl\|bosTau2\|chr13 (20588123-20587396)
	1-720, gnl\|Hg17\|chr10 (18869939-18871170)
	1-720, gnl\|Mm7\|chr2 (14936743-14937474)