Non-Coding RNA Search

Ss1.1-rche22_c6.5

Sequence:


               
               TGAGAATCTTCTTCCGCTCGCCCACCCCGGAGCGTGGGAGGTGGGAGCAGCGCGGAGCGA
GAGCGGATTCCAGTAACCCGACTTCGGAAGCCGTGCTGCCGCCCTCTGTAGCAGACGCTT
GTGCTCGGGAGCGTTTTGCGGTCTATAGGGTACTTTCAAAATCTCATGTGCGCTGTGCAA
CAGCCCTGTGAAGTATTCGGAACAATTGTTAAGTCCGTTTAGAGACCTTTCATCACTTCT
GGCCCGGAGAGCTTAACGGACTCGGGGAAGGTCACATGGCTGGCTTTTGATGGAGCTGCA
ACTTCAAGGGCCCGCCTTTGATACTTCGTTTCATTCGTTGGGCCGTTTGGAAAAAGGAGG
TTAGGGTCAGAGCGTTGGAAAACGGCAAATTTAGGACTGTTGGGAAGCAAAACCAGCTAC
CCGGTCCCGTCCCCCGCCCGTTAACAAAGAGATTTGCACATTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGAATCTTCTTCCGCTCGCCCACCCCGGAGCGTGGGAGGTGGGAGCAGCGCGGAGCGA
GAGCGGATTCCAGTAACCCGACTTCGGAAGCCGTGCTGCCGCCCTCTGTAGCAGACGCTT
GTGCTCGGGAGCGTTTTGCGGTCTATAGGGTACTTTCAAAATCTCATGTGCGCTGTGCAA
CAGCCCTGTGAAGTATTCGGAACAATTGTTAAGTCCGTTTAGAGACCTTTCATCACTTCT
GGCCCGGAGAGCTTAACGGACTCGGGGAAGGTCACATGGCTGGCTTTTGATGGAGCTGCA
ACTTCAAGGGCCCGCCTTTGATACTTCGTTTCATTCGTTGGGCCGTTTGGAAAAAGGAGG
TTAGGGTCAGAGCGTTGGAAAACGGCAAATTTAGGACTGTTGGGAAGCAAAACCAGCTAC
CCGGTCCCGTCCCCCGCCCGTTAACAAAGAGATTTGCACATTAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-480, gnl|bosTau2|chr19 (36026212-36026696)
               

               
               1-480, gnl|Hg17|chr4 (80054007-80053525)
               

               
               1-480, gnl|Mm7|chr5 (96210538-96210076)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr19 (36026212-36026696)
               

               
               1-480, gnl|Hg17|chr4 (80054007-80053525)
               

               
               1-480, gnl|Mm7|chr5 (96210538-96210076)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.207814)
               

               
               che (0.136314)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               che (0.136314)

	1-480, gnl\|bosTau2\|chr19 (36026212-36026696)
	1-480, gnl\|Hg17\|chr4 (80054007-80053525)
	1-480, gnl\|Mm7\|chr5 (96210538-96210076)