Non-Coding RNA Search

Ss1.1-rche28_a15.5

Sequence:


               
               TTTTTGCTTTTT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------TTCTTACCTCCTGGATGTTCACCTGGATTTGTCCAGTACCATCTTTGT
CAAGAGATTTGAAGGCACCTGGAGAAAAGAAGGGTTGAAGGGATTGGCTTTTCGGATAAA
AATATACTAATATATGGGAGGACGATAATAATAGCTCGAACTCTACTGAGTAATAAAGTG
CTTTCCGTGTATTAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTGCTTTTT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------TTCTTACCTCCTGGATGTTCACCTGGATTTGTCCAGTACCATCTTTGT
CAAGAGATTTGAAGGCACCTGGAGAAAAGAAGGGTTGAAGGGATTGGCTTTTCGGATAAA
AATATACTAATATATGGGAGGACGATAATAATAGCTCGAACTCTACTGAGTAATAAAGTG
CTTTCCGTGTATTAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-136, gnl|bosTau2|chr18 (41923509-41923387)
               

               
               14-136, gnl|Hg17|chr19 (41332384-41332234)
               

               
               14-136, gnl|Mm7|chr7 (27129219-27129334)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-136, gnl|bosTau2|chr18 (41923509-41923387)
               

               
               14-136, gnl|Hg17|chr19 (41332384-41332234)
               

               
               14-136, gnl|Mm7|chr7 (27129219-27129334)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.272628)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.272628)

	14-136, gnl\|bosTau2\|chr18 (41923509-41923387)
	14-136, gnl\|Hg17\|chr19 (41332384-41332234)
	14-136, gnl\|Mm7\|chr7 (27129219-27129334)