Non-Coding RNA Search

Ss1.1-rche28_b11.5

Sequence:


               
               TTTTTTTTTTTTTTTTGGTATGGATACATCACAATTTATTGACCCATTGCCCTATTAGTT
GGCATTCACTTTGTTCCAGTTGGATCTTTTGTCTTTACAAACAATAGTTTTATAAATATC
CTCATTCATGCATATTCTTTTGCACTGATGCTATCATTTCTGTGGGACCAATTCCCAAAA
ATAGAGATGGCTGGGTCAAAGTGCTCTTATTTAAGGTTTGTAAGTAAAAACTGAAATATA
TATTGCTGGATTGCCGGTGGAAATATAAGCTGATATAATCGCTTCGTAAGAGTACATGCA
GTTTTCCAAACTCCACTAGCAAAAGTTCTCTTAATTTTTCTTAACTTCATGAAGTGGAAG
TACCATCTCACTGGTTGTTTTAATTAGCATTTCCCTGAGTATTATTTACTTACGTTCATA
ATTTTCATAGGTTAATGCATCTGGAGTTGTTCTAAATAGTCATCTAGTTCATGTGGATTA
AAACTTAAATGTAAAAAAAATAAAATTATCAAAATCTTAGAAACAAATTTTGGATCCTAT
ATATAACCTGTAAATTAAGGGAGATCTTTTTAACAAAAAGTGAAAATCAAGAATATAAAA
AGGAAAAGATGAAAATACTTCACTGTTAAAAAAGGCTTAAAATCTTACACGATATANAAA
AGTATAAAGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTGGTATGGATACATCACAATTTATTGACCCATTGCCCTATTAGTT
GGCATTCACTTTGTTCCAGTTGGATCTTTTGTCTTTACAAACAATAGTTTTATAAATATC
CTCATTCATGCATATTCTTTTGCACTGATGCTATCATTTCTGTGGGACCAATTCCCAAAA
ATAGAGATGGCTGGGTCAAAGTGCTCTTATTTAAGGTTTGTAAGTAAAAACTGAAATATA
TATTGCTGGATTGCCGGTGGAAATATAAGCTGATATAATCGCTTCGTAAGAGTACATGCA
GTTTTCCAAACTCCACTAGCAAAAGTTCTCTTAATTTTTCTTAACTTCATGAAGTGGAAG
TACCATCTCACTGGTTGTTTTAATTAGCATTTCCCTGAGTATTATTTACTTACGTTCATA
ATTTTCATAGGTTAATGCATCTGGAGTTGTTCTAAATAGTCATCTAGTTCATGTGGATTA
AAACTTAAATGTAAAAAAAATAAAATTATCAAAATCTTAGAAACAAATTTTGGATCCTAT
ATATAACCTGTAAATTAAGGGAGATCTTTTTAACAAAAAGTGAAAATCAAGAATATAAAA
AGGAAAAGATGAAAATACTTCACTGTTAAAAAAGGCTTAAAATCTTACACGATATANAAA
AGTATAAAGAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               16-669, gnl|bosTau2|chr19 (23616161-23615517)
               

               
               16-669, gnl|Hg17|chr17 (16465292-16465930)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-669, gnl|bosTau2|chr19 (23616161-23615517)
               

               
               16-669, gnl|Hg17|chr17 (16465292-16465930)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	16-669, gnl\|bosTau2\|chr19 (23616161-23615517)
	16-669, gnl\|Hg17\|chr17 (16465292-16465930)