Ss1.1-rche28_d4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTCTGGCCGAGAGGCTTATCAGGATCATGAACAGCGCCGCGCAGCCAGATGGGAAGATC CGGGTGGCCACGCTGGAGCTGAGCTGCCTGCTGCTGAAGCAGCAAGTCGTCACCAGCACG GGCTGCATCATCAAGGACGTGCACCTGGCCTGCTTGGAGGGCGCCAGAGAAGAAAGTGTT CACCTGGTGCGGCACTTTTATAAGGGAGAAGAGATCTTCTTGGACATGTTCGAAGATGAG TACAGGAGCATGACGATGAAGCCCATGAACGTGGAATATCTCATGATGGACGCCTCCATC CTGCTGCCCCCAACGGGCACGCCGCTGACCGGCATCGACTTTGTGAAGCGGCTGCCTTGC GGGGATGTGGAGAAGACGCGGCGGGCCATCCGGGTGTTCTTCATGCTCCGCTCCCTGTCA CTGCAACTTCGAGGGGAGCCCGAGACCCAGCTGCCGCTGACCCGAGAGGAAGACCTGATC AAAACGGACGACGTCCTGGATCTGAACAACAGCGACCTGATCGCCTGCACGGTGATCACC AAGGACGGCGGCATGCTCCAGCGGTTCCTGGCCGTCGACATTTACCAGATGAGTCTGGTG GAGCCCGACGTGTCCCGGCTGGGCTGGGGAGTGGTCAAGTTTGCCGGCCTTCTGCAGGAC ATGCAGGTGACCGGCGTGGAGGACGACAGCCGCGCCCTGAACATCACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTCTGGCCGAGAGGCTTATCAGGATCATGAACAGCGCCGCGCAGCCAGATGGGAAGATC CGGGTGGCCACGCTGGAGCTGAGCTGCCTGCTGCTGAAGCAGCAAGTCGTCACCAGCACG GGCTGCATCATCAAGGACGTGCACCTGGCCTGCTTGGAGGGCGCCAGAGAAGAAAGTGTT CACCTGGTGCGGCACTTTTATAAGGGAGAAGAGATCTTCTTGGACATGTTCGAAGATGAG TACAGGAGCATGACGATGAAGCCCATGAACGTGGAATATCTCATGATGGACGCCTCCATC CTGCTGCCCCCAACGGGCACGCCGCTGACCGGCATCGACTTTGTGAAGCGGCTGCCTTGC GGGGATGTGGAGAAGACGCGGCGGGCCATCCGGGTGTTCTTCATGCTCCGCTCCCTGTCA CTGCAACTTCGAGGGGAGCCCGAGACCCAGCTGCCGCTGACCCGAGAGGAAGACCTGATC AAAACGGACGACGTCCTGGATCTGAACAACAGCGACCTGATCGCCTGCACGGTGATCACC AAGGACGGCGGCATGCTCCAGCGGTTCCTGGCCGTCGACATTTACCAGATGAGTCTGGTG GAGCCCGACGTGTCCCGGCTGGGCTGGGGAGTGGTCAAGTTTGCCGGCCTTCTGCAGGAC ATGCAGGTGACCGGCGTGGAGGACGACAGCCGCGCCCTGAACATCACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 47-160, gnl|bosTau2|chr25 (9321359-9321246) | |
| 47-160, gnl|canFam2|chr6 (34717522-34717391) | |
| 47-160, gnl|danRer3|chr3 (19243303-19243179) | |
| 47-160, gnl|dasNov1|scaffold_94684 (5674-5805) | |
| 47-160, gnl|echTel1|scaffold_320064 (893-1024) | |
| 47-160, gnl|fr1|chrUn (162470459-162470591) | |
| 47-160, gnl|hg17|chr16 (11043594-11043725) | |
| 47-160, gnl|Hg17|chr16 (11043609-11043722) | |
| 47-160, gnl|loxAfr1|scaffold_10836 (59770-59903) | |
| 47-160, gnl|mm7|chr16 (10307564-10307695) | |
| 47-160, gnl|Mm7|chr16 (10307579-10307692) | |
| 47-160, gnl|monDom2|scaffold_17 (33605705-33605576) | |
| 47-160, gnl|oryCun1|scaffold_211033 (92428-92291) | |
| 47-160, gnl|panTro1|chr18 (11374899-11375030) | |
| 47-160, gnl|rheMac2|chr20 (11111149-11111280) | |
| 47-160, gnl|rn3|chr10 (4983388-4983257) | |
| 255-385, gnl|bosTau2|chr25 (9313247-9313117) | |
| 255-385, gnl|canFam2|chr6 (34713658-34713503) | |
| 255-385, gnl|danRer3|chr3 (19236737-19236592) | |
| 255-385, gnl|dasNov1|scaffold_15845 (41631-41801) | |
| 255-385, gnl|echTel1|scaffold_142910 (325-152) | |
| 255-385, gnl|fr1|chrUn (162473850-162473996) | |
| 255-385, gnl|hg17|chr16 (11052864-11053035) | |
| 255-385, gnl|Hg17|chr16 (11052870-11053000) | |
| 255-385, gnl|loxAfr1|scaffold_10836 (66670-66839) | |
| 255-385, gnl|mm7|chr16 (10316317-10316486) | |
| 255-385, gnl|Mm7|chr16 (10316323-10316453) | |
| 255-385, gnl|monDom2|scaffold_17 (33586882-33586740) | |
| 255-385, gnl|panTro1|chr18 (11384171-11384342) | |
| 255-385, gnl|rheMac2|chr20 (11120299-11120470) | |
| 255-385, gnl|rn3|chr10 (4977468-4977299) | |
| 255-385, gnl|tetNig1|chrUn_random (40137160-40137302) | |
| 506-658, gnl|bosTau2|chr25 (9251325-9251173) | |
| 506-658, gnl|Hg17|chr16 (11121973-11122125) | |
| 506-658, gnl|Mm7|chr16 (10366017-10366169) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 47-160, gnl|bosTau2|chr25 (9321359-9321246) | |
| 47-160, gnl|canFam2|chr6 (34717522-34717391) | |
| 47-160, gnl|danRer3|chr3 (19243303-19243179) | |
| 47-160, gnl|dasNov1|scaffold_94684 (5674-5805) | |
| 47-160, gnl|echTel1|scaffold_320064 (893-1024) | |
| 47-160, gnl|fr1|chrUn (162470459-162470591) | |
| 47-160, gnl|hg17|chr16 (11043594-11043725) | |
| 47-160, gnl|Hg17|chr16 (11043609-11043722) | |
| 47-160, gnl|loxAfr1|scaffold_10836 (59770-59903) | |
| 47-160, gnl|mm7|chr16 (10307564-10307695) | |
| 47-160, gnl|Mm7|chr16 (10307579-10307692) | |
| 47-160, gnl|monDom2|scaffold_17 (33605705-33605576) | |
| 47-160, gnl|oryCun1|scaffold_211033 (92428-92291) | |
| 47-160, gnl|panTro1|chr18 (11374899-11375030) | |
| 47-160, gnl|rheMac2|chr20 (11111149-11111280) | |
| 47-160, gnl|rn3|chr10 (4983388-4983257) | |
| 255-385, gnl|bosTau2|chr25 (9313247-9313117) | |
| 255-385, gnl|canFam2|chr6 (34713658-34713503) | |
| 255-385, gnl|danRer3|chr3 (19236737-19236592) | |
| 255-385, gnl|dasNov1|scaffold_15845 (41631-41801) | |
| 255-385, gnl|echTel1|scaffold_142910 (325-152) | |
| 255-385, gnl|fr1|chrUn (162473850-162473996) | |
| 255-385, gnl|hg17|chr16 (11052864-11053035) | |
| 255-385, gnl|Hg17|chr16 (11052870-11053000) | |
| 255-385, gnl|loxAfr1|scaffold_10836 (66670-66839) | |
| 255-385, gnl|mm7|chr16 (10316317-10316486) | |
| 255-385, gnl|Mm7|chr16 (10316323-10316453) | |
| 255-385, gnl|monDom2|scaffold_17 (33586882-33586740) | |
| 255-385, gnl|panTro1|chr18 (11384171-11384342) | |
| 255-385, gnl|rheMac2|chr20 (11120299-11120470) | |
| 255-385, gnl|rn3|chr10 (4977468-4977299) | |
| 255-385, gnl|tetNig1|chrUn_random (40137160-40137302) | |
| 506-658, gnl|bosTau2|chr25 (9251325-9251173) | |
| 506-658, gnl|Hg17|chr16 (11121973-11122125) | |
| 506-658, gnl|Mm7|chr16 (10366017-10366169) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.136314) | |
| clu (0.119646) |