Non-Coding RNA Search

Ss1.1-rche29_h1.5

Sequence:


               
               TGAACTCTAAGGAGCAGTGGACCATCCTGTTCTCTGGGCACGTTCATCCTCATGGGAAGG
TCACGTGTGTGCACACCCGTCTTCTCACCCACTGGAAGGCTCACAGGCCAGGTCGAAGCA
GACACAGAAGATGCCAGCACTGCAGCCACACCAAGGGCCCCAAGTGACTTTTAGAAATTC
ACATTCACCAGCCTCGCTTCCCAGAGAAGGCAGCCCAAAGTACAAAAGCACAGATTCTAT
CCTTTACTAACTGCAGAATCTCTGGCAAGTAACATAGCCTCTCTGAGCATCACTGTAAAG
TGGGGATTTTAAAACCCACCTCCCAAGGATGGGAGGATTCCATGAGTTGACGTAAGGAAA
GCACCTAGGTCACAGCATGACACCTAGTAAGCACTCAATAAATCACTCATTTCCTTTCCT
TATGTTGTTTCTTTCAACTTTCTGAAAGGATCAGTGAAGTCAGCTATCCAAGAAGTTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAACTCTAAGGAGCAGTGGACCATCCTGTTCTCTGGGCACGTTCATCCTCATGGGAAGG
TCACGTGTGTGCACACCCGTCTTCTCACCCACTGGAAGGCTCACAGGCCAGGTCGAAGCA
GACACAGAAGATGCCAGCACTGCAGCCACACCAAGGGCCCCAAGTGACTTTTAGAAATTC
ACATTCACCAGCCTCGCTTCCCAGAGAAGGCAGCCCAAAGTACAAAAGCACAGATTCTAT
CCTTTACTAACTGCAGAATCTCTGGCAAGTAACATAGCCTCTCTGAGCATCACTGTAAAG
TGGGGATTTTAAAACCCACCTCCCAAGGATGGGAGGATTCCATGAGTTGACGTAAGGAAA
GCACCTAGGTCACAGCATGACACCTAGTAAGCACTCAATAAATCACTCATTTCCTTTCCT
TATGTTGTTTCTTTCAACTTTCTGAAAGGATCAGTGAAGTCAGCTATCCAAGAAGTTTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-478, gnl|bosTau2|chr1 (29845130-29844658)
               

               
               1-478, gnl|Hg17|chr3 (120844022-120843536)
               

               
               1-478, gnl|Mm7|chr16 (38084707-38085137)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-478, gnl|bosTau2|chr1 (29845130-29844658)
               

               
               1-478, gnl|Hg17|chr3 (120844022-120843536)
               

               
               1-478, gnl|Mm7|chr16 (38084707-38085137)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.272628)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.272628)

	1-478, gnl\|bosTau2\|chr1 (29845130-29844658)
	1-478, gnl\|Hg17\|chr3 (120844022-120843536)
	1-478, gnl\|Mm7\|chr16 (38084707-38085137)