Ss1.1-rche30_a15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTACATCCACAGAGCAGGGAGGGTGGGCCGTGTGGGAAGCAAGGTGCCAGGCACTGTCAT CAGCTTTGTGACCCACCCTTGGGATGTGAGCCTGGTTCAGAAGATTGAGCTGGCAGCCCG CCGGAGGAGAAGCCTTCCAGGACTAGGGTCCTCAGTGAGAGAGCCTTTGCCTCAGCAAAC CTGATTACAGCCGGCTTTAGTATGATGCCAAAACAGGGATCTTTACCTGTGTGTGTTGGG TAGGTGAGCACACTAGTCATCGCTCTGGACAGCCTGCTCCCCTTCCTGAAGGCCTGGGCT GCTCTCTGGCTTCAGAAGATAAAGCTCCTGGCCAGCACTGAAAGGTGAACTGCTGAGCGT GGCTGTCTGTGGTCTTTCATGTGAAAAATAAAGTCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTACATCCACAGAGCAGGGAGGGTGGGCCGTGTGGGAAGCAAGGTGCCAGGCACTGTCAT CAGCTTTGTGACCCACCCTTGGGATGTGAGCCTGGTTCAGAAGATTGAGCTGGCAGCCCG CCGGAGGAGAAGCCTTCCAGGACTAGGGTCCTCAGTGAGAGAGCCTTTGCCTCAGCAAAC CTGATTACAGCCGGCTTTAGTATGATGCCAAAACAGGGATCTTTACCTGTGTGTGTTGGG TAGGTGAGCACACTAGTCATCGCTCTGGACAGCCTGCTCCCCTTCCTGAAGGCCTGGGCT GCTCTCTGGCTTCAGAAGATAAAGCTCCTGGCCAGCACTGAAAGGTGAACTGCTGAGCGT GGCTGTCTGTGGTCTTTCATGTGAAAAATAAAGTCG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 2-120, + strand, RNAz p=0.939233 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 2-120, + strand, RNAz p=0.939233 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_018380, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 2-303, gnl|bosTau2|chr18 (14879390-14879693) | |
| 2-303, gnl|Hg17|chr16 (66613166-66612829) | |
| 2-303, gnl|Mm7|chr8 (104608839-104608553) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-303, gnl|bosTau2|chr18 (14879390-14879693) | |
| 2-303, gnl|Hg17|chr16 (66613166-66612829) | |
| 2-303, gnl|Mm7|chr8 (104608839-104608553) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| che (0.136314) |