Non-Coding RNA Search

Ss1.1-rche31_f17.5

Sequence:


               
               AAGAAACGGAAGAGGACCATGAAGAGGACCCCATGATGTATCCAGAAATGGAATTAGAAA
GTGAAAAAGAAAATAAAGAGCAGAACCAATCTAAACCTAAGCATGATGGCCGACGGCGGA
TTCGGGAGGATGGACTCATGAAAATCTATGTGCTGCAGCTGCTGGCAAGGACCATGTTTG
AGGTGGGTTTTCTGATAGGGCAGTATTTTCTGTATGGCTTCCAAGTCCACCCATTTTATG
TATGCAGCAGAGTTCCTTGCCCTCATAAGATAGACTGCTTCATTTCTAGACCCACTGAAA
AGACCATCTTTCTTCTGATAATGTATGGTGTGACAGGCCTTTGCCTACTGCTTAACATTT
GGGAGATGCTTCATTTAGGATTTGGGACAATTCGAGACTCGCTAAACAGTAAAAGGAGGG
AACTGGAAGATCCGGGTGCTTATAATTATCCTTTCACTTGGAATACACCATCTGCTCCCC
CTGGCTATAACATTGCCGTCAAACCAGATCAAATCCAGTACACCGAACTGTCCAACGCTA
AGATCGCCTACAAGCAAAACAAGGCCAACATTGCCCAGGAACAACAGTACGGCAGCCATG
AGGAGACCCTCCCCGCGGACCTGGAGACTCTGCAGAGGGAGATCAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAACGGAAGAGGACCATGAAGAGGACCCCATGATGTATCCAGAAATGGAATTAGAAA
GTGAAAAAGAAAATAAAGAGCAGAACCAATCTAAACCTAAGCATGATGGCCGACGGCGGA
TTCGGGAGGATGGACTCATGAAAATCTATGTGCTGCAGCTGCTGGCAAGGACCATGTTTG
AGGTGGGTTTTCTGATAGGGCAGTATTTTCTGTATGGCTTCCAAGTCCACCCATTTTATG
TATGCAGCAGAGTTCCTTGCCCTCATAAGATAGACTGCTTCATTTCTAGACCCACTGAAA
AGACCATCTTTCTTCTGATAATGTATGGTGTGACAGGCCTTTGCCTACTGCTTAACATTT
GGGAGATGCTTCATTTAGGATTTGGGACAATTCGAGACTCGCTAAACAGTAAAAGGAGGG
AACTGGAAGATCCGGGTGCTTATAATTATCCTTTCACTTGGAATACACCATCTGCTCCCC
CTGGCTATAACATTGCCGTCAAACCAGATCAAATCCAGTACACCGAACTGTCCAACGCTA
AGATCGCCTACAAGCAAAACAAGGCCAACATTGCCCAGGAACAACAGTACGGCAGCCATG
AGGAGACCCTCCCCGCGGACCTGGAGACTCTGCAGAGGGAGATCAGAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|21070326|gb|AAM34256.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|21070326|gb|AAM34256.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-648, gnl|bosTau2|chr19 (37486487-37487134)
               

               
               1-648, gnl|Hg17|chr17 (40238329-40237682)
               

               
               1-648, gnl|Mm7|chr11 (102909834-102909187)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-648, gnl|bosTau2|chr19 (37486487-37487134)
               

               
               1-648, gnl|Hg17|chr17 (40238329-40237682)
               

               
               1-648, gnl|Mm7|chr11 (102909834-102909187)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               che (0.272628)
               

               
               jca (0.11396)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.272628)
               

               
               jca (0.11396)

	1-648, gnl\|bosTau2\|chr19 (37486487-37487134)
	1-648, gnl\|Hg17\|chr17 (40238329-40237682)
	1-648, gnl\|Mm7\|chr11 (102909834-102909187)