Non-Coding RNA Search

Ss1.1-rche31_i24.5

Sequence:


               
               TAAGCTTGAAATAGTCACGTGATACTTTGATTGATGTCACATACCTTACAGTTCCTCCGT
CGTGTTCTCAGGGTTGAGTGGCCCCCTTAGCTACCTATTTTTACCTTAAATGCAAAGCAC
ATAAAAGGATTTCTTCAAATAAAAGTTTGCCTGAAGAACCTGGTAAAAGGACACACGGTA
AGAGTTAATTTTTTTTATTTCATTTTTTTCAAACCTCCACTATTTCTTTTGCTTTTTTTA
ATCCATCCTGAAAATTCTACAGATATGTTTCCATTATTGTTAAAAAGGTGGATAAATGAC
GAAGAACTACCTTACTAAGATTATACCCATACTCATTTTTAAAAAGATACTCAAAACATA
AGCTTTTTTAAAAAAAAGAAAAACAGCCATTTTTTAATGATATTTTTACAATAGAGGTAT
TTTGCTGCTAAGACAGATCAAAACCAAAAGTTTTCAGAAAACTGTGATGGATTCAGAAAG
CTATGATGCTCCTTGAGACACAAGAACACAGAAGTTGGAGGAATCCTAATGGGGTAAAAG
CAGAGGGTCATTAAAAGTGGTCCTTGGGAGTTCCCTGGTGGTCTAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAGCTTGAAATAGTCACGTGATACTTTGATTGATGTCACATACCTTACAGTTCCTCCGT
CGTGTTCTCAGGGTTGAGTGGCCCCCTTAGCTACCTATTTTTACCTTAAATGCAAAGCAC
ATAAAAGGATTTCTTCAAATAAAAGTTTGCCTGAAGAACCTGGTAAAAGGACACACGGTA
AGAGTTAATTTTTTTTATTTCATTTTTTTCAAACCTCCACTATTTCTTTTGCTTTTTTTA
ATCCATCCTGAAAATTCTACAGATATGTTTCCATTATTGTTAAAAAGGTGGATAAATGAC
GAAGAACTACCTTACTAAGATTATACCCATACTCATTTTTAAAAAGATACTCAAAACATA
AGCTTTTTTAAAAAAAAGAAAAACAGCCATTTTTTAATGATATTTTTACAATAGAGGTAT
TTTGCTGCTAAGACAGATCAAAACCAAAAGTTTTCAGAAAACTGTGATGGATTCAGAAAG
CTATGATGCTCCTTGAGACACAAGAACACAGAAGTTGGAGGAATCCTAATGGGGTAAAAG
CAGAGGGTCATTAAAAGTGGTCCTTGGGAGTTCCCTGGTGGTCTAGGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               41-540, gnl|bosTau2|chr20 (26274543-26275045)
               

               
               41-540, gnl|Hg17|chr6 (24913899-24913293)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-540, gnl|bosTau2|chr20 (26274543-26275045)
               

               
               41-540, gnl|Hg17|chr6 (24913899-24913293)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               che (0.136314)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               che (0.136314)

	41-540, gnl\|bosTau2\|chr20 (26274543-26275045)
	41-540, gnl\|Hg17\|chr6 (24913899-24913293)