Ss1.1-rche32_n19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGAGACGGAGGCCTGTGTGGAGGTGCCCCTCCGTCCCTTCGCTCCCGGGGACCCTCAG GAAAAACCCAGCACCCCGGCCCCGTGGCCAGCCCCTTCCCCCAGGCTCTCTCCGCTCGAT TTCGCCACCGTTATGTGGGAAGCGAATCCGCCTGATGTGCAGGAAGTATCATGGTTTGCC AATTAAAAGCCGGAAACTCAAGGCAGAATGTGGCGTTGTGGCAGATCTGATTCATTCTGC TAACATTTATCCACGGCCTCCTCCCCGATGAACCATTTGCATGTGCGCCTTTTCTCGTCT GTAAATGTATCCTAACCTCGATCCATTACTACTGTGGTTACAGGATTTTAAAGTTATTCA GGAGATGTTTCACAAAGAAGAAGAATTCTTAAACAAAACGACGGACAGCGAGATGGACGA GATGGACACGTCCGACACGCAGTGGGGCTGGTTCTACCTGGCGGAGTGTGGGAAGTGGCA CATGTATCAGCCGGATACCAACATTCAGTGTTCAGTTAGCAGTGAAGATATCGAAAAAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGAGACGGAGGCCTGTGTGGAGGTGCCCCTCCGTCCCTTCGCTCCCGGGGACCCTCAG GAAAAACCCAGCACCCCGGCCCCGTGGCCAGCCCCTTCCCCCAGGCTCTCTCCGCTCGAT TTCGCCACCGTTATGTGGGAAGCGAATCCGCCTGATGTGCAGGAAGTATCATGGTTTGCC AATTAAAAGCCGGAAACTCAAGGCAGAATGTGGCGTTGTGGCAGATCTGATTCATTCTGC TAACATTTATCCACGGCCTCCTCCCCGATGAACCATTTGCATGTGCGCCTTTTCTCGTCT GTAAATGTATCCTAACCTCGATCCATTACTACTGTGGTTACAGGATTTTAAAGTTATTCA GGAGATGTTTCACAAAGAAGAAGAATTCTTAAACAAAACGACGGACAGCGAGATGGACGA GATGGACACGTCCGACACGCAGTGGGGCTGGTTCTACCTGGCGGAGTGTGGGAAGTGGCA CATGTATCAGCCGGATACCAACATTCAGTGTTCAGTTAGCAGTGAAGATATCGAAAAAAG |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 2-150, gnl|bosTau2|chr5 (63256261-63256409) | |
| 2-150, gnl|canFam2|chr27 (44014786-44014166) | |
| 2-150, gnl|dasNov1|scaffold_6890 (965-324) | |
| 2-150, gnl|echTel1|scaffold_269629 (5612-4956) | |
| 2-150, gnl|hg17|chr12 (3852390-3853023) | |
| 2-150, gnl|Hg17|chr12 (3852800-3852639) | |
| 2-150, gnl|loxAfr1|scaffold_3810 (117936-118596) | |
| 2-150, gnl|mm7|chr6 (127479107-127478495) | |
| 2-150, gnl|Mm7|chr6 (127478698-127478851) | |
| 2-150, gnl|oryCun1|scaffold_215076 (101394-102004) | |
| 2-150, gnl|panTro1|chr10 (3937143-3937775) | |
| 2-150, gnl|rheMac2|chr11 (3980614-3981248) | |
| 2-150, gnl|rn3|chr4 (164111638-164111032) | |
| 357-490, gnl|bosTau2|chr5 (63274387-63274520) | |
| 357-490, gnl|canFam2|chr27 (44036308-44036207) | |
| 357-490, gnl|danRer3|chr5 (54120940-54120840) | |
| 357-490, gnl|dasNov1|scaffold_6890 (39261-39159) | |
| 357-490, gnl|echTel1|scaffold_292706 (2814-2713) | |
| 357-490, gnl|fr1|chrUn (76088756-76088654) | |
| 357-490, gnl|galGal2|chr1 (69024583-69024491) | |
| 357-490, gnl|hg17|chr12 (3809300-3809402) | |
| 357-490, gnl|Hg17|chr12 (3809450-3809317) | |
| 357-490, gnl|loxAfr1|scaffold_3810 (98563-98664) | |
| 357-490, gnl|mm7|chr6 (127495866-127495776) | |
| 357-490, gnl|Mm7|chr6 (127495726-127495859) | |
| 357-490, gnl|monDom2|scaffold_31 (21926488-21926386) | |
| 357-490, gnl|oryCun1|scaffold_215076 (73391-73493) | |
| 357-490, gnl|panTro1|chr10 (3896627-3896729) | |
| 357-490, gnl|rheMac2|chr11 (3947448-3947550) | |
| 357-490, gnl|rn3|chr4 (164162272-164162173) | |
| 357-490, gnl|tetNig1|chr19 (2402396-2402473) | |
| 357-490, gnl|xenTro1|scaffold_1061 (25012-24922) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-150, gnl|bosTau2|chr5 (63256261-63256409) | |
| 2-150, gnl|canFam2|chr27 (44014786-44014166) | |
| 2-150, gnl|dasNov1|scaffold_6890 (965-324) | |
| 2-150, gnl|echTel1|scaffold_269629 (5612-4956) | |
| 2-150, gnl|hg17|chr12 (3852390-3853023) | |
| 2-150, gnl|Hg17|chr12 (3852800-3852639) | |
| 2-150, gnl|loxAfr1|scaffold_3810 (117936-118596) | |
| 2-150, gnl|mm7|chr6 (127479107-127478495) | |
| 2-150, gnl|Mm7|chr6 (127478698-127478851) | |
| 2-150, gnl|oryCun1|scaffold_215076 (101394-102004) | |
| 2-150, gnl|panTro1|chr10 (3937143-3937775) | |
| 2-150, gnl|rheMac2|chr11 (3980614-3981248) | |
| 2-150, gnl|rn3|chr4 (164111638-164111032) | |
| 357-490, gnl|bosTau2|chr5 (63274387-63274520) | |
| 357-490, gnl|canFam2|chr27 (44036308-44036207) | |
| 357-490, gnl|danRer3|chr5 (54120940-54120840) | |
| 357-490, gnl|dasNov1|scaffold_6890 (39261-39159) | |
| 357-490, gnl|echTel1|scaffold_292706 (2814-2713) | |
| 357-490, gnl|fr1|chrUn (76088756-76088654) | |
| 357-490, gnl|galGal2|chr1 (69024583-69024491) | |
| 357-490, gnl|hg17|chr12 (3809300-3809402) | |
| 357-490, gnl|Hg17|chr12 (3809450-3809317) | |
| 357-490, gnl|loxAfr1|scaffold_3810 (98563-98664) | |
| 357-490, gnl|mm7|chr6 (127495866-127495776) | |
| 357-490, gnl|Mm7|chr6 (127495726-127495859) | |
| 357-490, gnl|monDom2|scaffold_31 (21926488-21926386) | |
| 357-490, gnl|oryCun1|scaffold_215076 (73391-73493) | |
| 357-490, gnl|panTro1|chr10 (3896627-3896729) | |
| 357-490, gnl|rheMac2|chr11 (3947448-3947550) | |
| 357-490, gnl|rn3|chr4 (164162272-164162173) | |
| 357-490, gnl|tetNig1|chr19 (2402396-2402473) | |
| 357-490, gnl|xenTro1|scaffold_1061 (25012-24922) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cag (0.151194) | |
| che (0.136314) |