Ss1.1-rche32_o13.5
|
AACTACGAGGCTCTCCTAGGCCTCACCAACCTGTCTGGGCGGAGTGACAAACTCCGGCAG
AAGATCTTTAAGGAGAAGGCCCTGCCGGACATCGAGAACTACATGTTCGAGAACCATGAC
CAGCTGCGGCAGGCCGCCACCGAGTGCATGTGCAACATGGTGGTGAACAAGGAGGTACAG
GAGAGGTTCCTGGCTGATGGGAATGACCGGCTGAAGCTGGTGGTGCTGCTCTGCGGGGAG
GATGATGACAAGGTGCAGAATGCGGCCGCGGGGGCCTTGGCCATGCTGACAGCAGCACAT
AAGAAACTGTGCTTCAAGATGACGCAAGTGACGACTCAGTGGTTGGAGATCCTCCAGCGG
CTTTGCTTACATGATCGGCTGTCTGTCCAACACCGGGGCCTGGTCATTGCCTACAACCTG
CTGGCGGCTGATGCTGAGCTGGCCAAGAAGCTGGTGGAGAGTGAGCTGCTGGAGATCCTG
ACCGTGGTGGGCAAACAGGAGCCCGATGAGAAGAAGGCAGCCGTGGTTCAGACAGCTCGG
GAATGTCTCATCAAATGCATGGACTATGGCTTCATTAAACCAGTGTCTTAGAGGCCCAGA
GGGCCGCTCCTATACTGTGTTGAGTTCTGAGCTGAGAACTCCTGGGCTGTCAGTTCAGCC
AGGGATCATAGCAGCAACAATGAAGTCTCCATATCAAAGAAGGACTTGATTGTTCTCCGA
GTTGTGAATTGTCCCCTTTGCCCTAGGAAAGTTTGGATGTTTCATTAGCTCTCTTGCTCC
TTATATCTGTCATGCTCCAGAAATTCCTAGAGTAATTTTCATCAGTGATTAGGAAGACAA
ATTGGATAATTCTTTCTGTACCCATTCCAAAGGCCAGGATAATGGGCTGAAAAGTTTATG
TTTTGGAAAATGGATCGTGTGGTAAGATAGAACCTAACAGGTGTGTGACTATAAAGCTAG
TGCTGGTGCCTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AACTACGAGGCTCTCCTAGGCCTCACCAACCTGTCTGGGCGGAGTGACAAACTCCGGCAG
AAGATCTTTAAGGAGAAGGCCCTGCCGGACATCGAGAACTACATGTTCGAGAACCATGAC
CAGCTGCGGCAGGCCGCCACCGAGTGCATGTGCAACATGGTGGTGAACAAGGAGGTACAG
GAGAGGTTCCTGGCTGATGGGAATGACCGGCTGAAGCTGGTGGTGCTGCTCTGCGGGGAG
GATGATGACAAGGTGCAGAATGCGGCCGCGGGGGCCTTGGCCATGCTGACAGCAGCACAT
AAGAAACTGTGCTTCAAGATGACGCAAGTGACGACTCAGTGGTTGGAGATCCTCCAGCGG
CTTTGCTTACATGATCGGCTGTCTGTCCAACACCGGGGCCTGGTCATTGCCTACAACCTG
CTGGCGGCTGATGCTGAGCTGGCCAAGAAGCTGGTGGAGAGTGAGCTGCTGGAGATCCTG
ACCGTGGTGGGCAAACAGGAGCCCGATGAGAAGAAGGCAGCCGTGGTTCAGACAGCTCGG
GAATGTCTCATCAAATGCATGGACTATGGCTTCATTAAACCAGTGTCTTAGAGGCCCAGA
GGGCCGCTCCTATACTGTGTTGAGTTCTGAGCTGAGAACTCCTGGGCTGTCAGTTCAGCC
AGGGATCATAGCAGCAACAATGAAGTCTCCATATCAAAGAAGGACTTGATTGTTCTCCGA
GTTGTGAATTGTCCCCTTTGCCCTAGGAAAGTTTGGATGTTTCATTAGCTCTCTTGCTCC
TTATATCTGTCATGCTCCAGAAATTCCTAGAGTAATTTTCATCAGTGATTAGGAAGACAA
ATTGGATAATTCTTTCTGTACCCATTCCAAAGGCCAGGATAATGGGCTGAAAAGTTTATG
TTTTGGAAAATGGATCGTGTGGTAAGATAGAACCTAACAGGTGTGTGACTATAAAGCTAG
TGCTGGTGCCTC
|
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173-330, gnl|bosTau2|chr19 (9058640-9058797) |
|
173-330, gnl|canFam2|chr9 (41516028-41515861) |
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173-330, gnl|danRer3|chr3 (10997316-10997149) |
|
173-330, gnl|echTel1|scaffold_165492 (11647-11483) |
|
173-330, gnl|fr1|chrUn (92200418-92200578) |
|
173-330, gnl|galGal2|chr19 (4188883-4188717) |
|
173-330, gnl|hg17|chr17 (30534554-30534721) |
|
173-330, gnl|Hg17|chr17 (30534557-30534714) |
|
173-330, gnl|loxAfr1|scaffold_618 (160196-160363) |
|
173-330, gnl|mm7|chr11 (83021759-83021926) |
|
173-330, gnl|Mm7|chr11 (83021762-83021919) |
|
173-330, gnl|monDom2|scaffold_44 (7498856-7498689) |
|
173-330, gnl|oryCun1|scaffold_204575 (39830-39661) |
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173-330, gnl|panTro1|chr19 (34053880-34054047) |
|
173-330, gnl|rheMac2|chr16 (30483863-30484030) |
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173-330, gnl|rn3|chr10 (71166715-71166882) |
|
173-330, gnl|tetNig1|chr12 (2886688-2886526) |
|
173-330, gnl|xenTro1|scaffold_38 (1073156-1072990) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
173-330, gnl|bosTau2|chr19 (9058640-9058797) |
|
173-330, gnl|canFam2|chr9 (41516028-41515861) |
|
173-330, gnl|danRer3|chr3 (10997316-10997149) |
|
173-330, gnl|echTel1|scaffold_165492 (11647-11483) |
|
173-330, gnl|fr1|chrUn (92200418-92200578) |
|
173-330, gnl|galGal2|chr19 (4188883-4188717) |
|
173-330, gnl|hg17|chr17 (30534554-30534721) |
|
173-330, gnl|Hg17|chr17 (30534557-30534714) |
|
173-330, gnl|loxAfr1|scaffold_618 (160196-160363) |
|
173-330, gnl|mm7|chr11 (83021759-83021926) |
|
173-330, gnl|Mm7|chr11 (83021762-83021919) |
|
173-330, gnl|monDom2|scaffold_44 (7498856-7498689) |
|
173-330, gnl|oryCun1|scaffold_204575 (39830-39661) |
|
173-330, gnl|panTro1|chr19 (34053880-34054047) |
|
173-330, gnl|rheMac2|chr16 (30483863-30484030) |
|
173-330, gnl|rn3|chr10 (71166715-71166882) |
|
173-330, gnl|tetNig1|chr12 (2886688-2886526) |
|
173-330, gnl|xenTro1|scaffold_38 (1073156-1072990) |
|
ste (0.540833) |
|
mas (0.42061) |
|
hea (0.408998) |
|
vin (0.332557) |
|
hlv (0.278513) |
|
che (0.272628) |
|
ssp (0.271039) |
|
ldo (0.194005) |
|
tbr (0.154178) |
|
ese (0.126502) |
|
ste (0.540833) |
|
mas (0.42061) |
|
hea (0.408998) |
|
vin (0.332557) |
|
hlv (0.278513) |
|
che (0.272628) |
|
ssp (0.271039) |
|
ldo (0.194005) |
|
tbr (0.154178) |
|
ese (0.126502) |
