Non-Coding RNA Search

Ss1.1-rche35_c23.5

Sequence:


               
               CAGCCATATTTTCTCTTGAGGCTTATTTGTCCTGTGTATTTTAGTGTATTTCTCGTGACT
TAATTGAAAATATTCTTTTTTAGCACATGAAATCTGAACAGCTATCCAGCTTCTTCAGGT
ATTCTCTAAAATATGGGTAGCTCTGTAATCAAACTTGAAATGCCTTGGGGAACATATTCT
TCTTTTAACCATAAACTATTGTACAAATGTACCAAAAGAGGAACTATGGCTTCTATAATT
TTTTTTTTCTTTAGACCAACCTCAAGTTCTTGCAGCAAAATTTCTTTACTTGATGTGCTA
CAAGTGAACTAGGGTCTTTAAAATGTATTTTAGAATTTTTTTTCCAACATGCTTCTTCCC
TTGCAACAGGTACCGTTTTGCAGAGATTCGCTACCATCGCCCTGAGGAGACCCACAAGGG
GCGTACAGTTCCAGCTCATGTGGAGACAGTGGTTTTATTTTTCCCGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCCATATTTTCTCTTGAGGCTTATTTGTCCTGTGTATTTTAGTGTATTTCTCGTGACT
TAATTGAAAATATTCTTTTTTAGCACATGAAATCTGAACAGCTATCCAGCTTCTTCAGGT
ATTCTCTAAAATATGGGTAGCTCTGTAATCAAACTTGAAATGCCTTGGGGAACATATTCT
TCTTTTAACCATAAACTATTGTACAAATGTACCAAAAGAGGAACTATGGCTTCTATAATT
TTTTTTTTCTTTAGACCAACCTCAAGTTCTTGCAGCAAAATTTCTTTACTTGATGTGCTA
CAAGTGAACTAGGGTCTTTAAAATGTATTTTAGAATTTTTTTTCCAACATGCTTCTTCCC
TTGCAACAGGTACCGTTTTGCAGAGATTCGCTACCATCGCCCTGAGGAGACCCACAAGGG
GCGTACAGTTCCAGCTCATGTGGAGACAGTGGTTTTATTTTTCCCGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-227, gnl|bosTau2|chr28 (16604361-16604136)
               

               
               1-227, gnl|Hg17|chr10 (70185664-70185894)
               

               
               1-227, gnl|Mm7|chr10 (62283691-62283464)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-227, gnl|bosTau2|chr28 (16604361-16604136)
               

               
               1-227, gnl|Hg17|chr10 (70185664-70185894)
               

               
               1-227, gnl|Mm7|chr10 (62283691-62283464)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	1-227, gnl\|bosTau2\|chr28 (16604361-16604136)
	1-227, gnl\|Hg17\|chr10 (70185664-70185894)
	1-227, gnl\|Mm7\|chr10 (62283691-62283464)