Non-Coding RNA Search

Ss1.1-rche_0330.5

Sequence:


               
               GTTTATTCTTAGAAAAGAAGAAATCCTGGACATGTAGCCAGATATGGGAAAAAAATATTT
AAAGGGAAACATTTTTTGGCATGAAATAGAAAGAATTTTTTTTCTGAAACACTTGGCAAA
GCGGAAAGCTTAAAAACATTTCTCAACTTGACTAGTTACAAAACCACACAGTATGTTTTG
CTTTTCTGTTGGGGGAGAAGGAAAATTCTCATCTGGAATGGCCTTATGAGTCCCATCACT
TCCCTTCTCCCAATGGGGATTAGTTACATTTAACTTAATCACTCCTGTTGGAGTGCCCAG
GCTGTCATCTGTCTGCCCCCAAAATGAACACATGGCATTCTGAAAAAGAAGTTAAAGCAG
CCAATTTCTCAGAAAATATGTGAGTGACCCTCAGAGGTTAACAGCACAATCATTTACACA
AAAATTGCTTCAAATGTGGATCATGTGTTCTTCTGGGATAGACAGAGTATCTGTGTCTGC
TAAAAGCTGCACACAAGCTGTCCTGACTGCATCCCATGTATAGGCAGATGCCAGAGAAGA
AGACATGGAAATTACAAAAATGGGAGTTCCAGTGGTGGCTCAGTGGAAACGAAACTGACT
AGGATCTATGAGGATGCAGTTTCGATCCCTGGCCTCGCTCAATGGGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTATTCTTAGAAAAGAAGAAATCCTGGACATGTAGCCAGATATGGGAAAAAAATATTT
AAAGGGAAACATTTTTTGGCATGAAATAGAAAGAATTTTTTTTCTGAAACACTTGGCAAA
GCGGAAAGCTTAAAAACATTTCTCAACTTGACTAGTTACAAAACCACACAGTATGTTTTG
CTTTTCTGTTGGGGGAGAAGGAAAATTCTCATCTGGAATGGCCTTATGAGTCCCATCACT
TCCCTTCTCCCAATGGGGATTAGTTACATTTAACTTAATCACTCCTGTTGGAGTGCCCAG
GCTGTCATCTGTCTGCCCCCAAAATGAACACATGGCATTCTGAAAAAGAAGTTAAAGCAG
CCAATTTCTCAGAAAATATGTGAGTGACCCTCAGAGGTTAACAGCACAATCATTTACACA
AAAATTGCTTCAAATGTGGATCATGTGTTCTTCTGGGATAGACAGAGTATCTGTGTCTGC
TAAAAGCTGCACACAAGCTGTCCTGACTGCATCCCATGTATAGGCAGATGCCAGAGAAGA
AGACATGGAAATTACAAAAATGGGAGTTCCAGTGGTGGCTCAGTGGAAACGAAACTGACT
AGGATCTATGAGGATGCAGTTTCGATCCCTGGCCTCGCTCAATGGGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-556, gnl|bosTau2|chr27 (9216211-9216773)
               

               
               2-556, gnl|Hg17|chr4 (187034923-187034366)
               

               
               2-556, gnl|Mm7|chr8 (44467610-44468648)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-556, gnl|bosTau2|chr27 (9216211-9216773)
               

               
               2-556, gnl|Hg17|chr4 (187034923-187034366)
               

               
               2-556, gnl|Mm7|chr8 (44467610-44468648)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               che (0.136314)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)

	2-556, gnl\|bosTau2\|chr27 (9216211-9216773)
	2-556, gnl\|Hg17\|chr4 (187034923-187034366)
	2-556, gnl\|Mm7\|chr8 (44467610-44468648)