Non-Coding RNA Search

Ss1.1-rcje01_n18.5

Sequence:


               
               GCAGTCCCGTCTGGCCACACTCCGCAGCTAGGACCGCCCGGCTGGGCCACAGGCTCTCTT
CCTGGCCCAGGCGTCACCATTTTATTTGTCTCTTGCACTACACTCCTGGGGGAGGCTCTG
CATTCTGGAGAATGTTCTCTGCTAATCTCTCTTCACTCTCTGCAGAGGTTTGGGATCTCA
GTGGGATGGTTCTGGAGAGGTGGTGTAATAAATGCATCATCTTCAGGAGTATAAACAGAA
GTATCTCTTGAGGGGCGAGGGCAAATCTCACGAAGCGCTTCTGAGGATAGACTTGATTGC
CTGAATGTTGAGGACTGTACATTTTTTTTTGTCTGTAAAACACTATATAAATGGATTTTA
ATAAATTTCTGCTTTAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGTCCCGTCTGGCCACACTCCGCAGCTAGGACCGCCCGGCTGGGCCACAGGCTCTCTT
CCTGGCCCAGGCGTCACCATTTTATTTGTCTCTTGCACTACACTCCTGGGGGAGGCTCTG
CATTCTGGAGAATGTTCTCTGCTAATCTCTCTTCACTCTCTGCAGAGGTTTGGGATCTCA
GTGGGATGGTTCTGGAGAGGTGGTGTAATAAATGCATCATCTTCAGGAGTATAAACAGAA
GTATCTCTTGAGGGGCGAGGGCAAATCTCACGAAGCGCTTCTGAGGATAGACTTGATTGC
CTGAATGTTGAGGACTGTACATTTTTTTTTGTCTGTAAAACACTATATAAATGGATTTTA
ATAAATTTCTGCTTTAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               81-377, gnl|bosTau2|chr11 (35233941-35233628)
               

               
               81-377, gnl|Hg17|chr2 (86644535-86644232)
               

               
               81-377, gnl|Mm7|chr6 (71597797-71598095)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               81-377, gnl|bosTau2|chr11 (35233941-35233628)
               

               
               81-377, gnl|Hg17|chr2 (86644535-86644232)
               

               
               81-377, gnl|Mm7|chr6 (71597797-71598095)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cje (0.495704)
               

               
               cte (0.29274)
               

               
               cut (0.169924)
               

               
               cbl (0.114797)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.495704)
               

               
               cte (0.29274)
               

               
               cut (0.169924)
               

               
               cbl (0.114797)

	81-377, gnl\|bosTau2\|chr11 (35233941-35233628)
	81-377, gnl\|Hg17\|chr2 (86644535-86644232)
	81-377, gnl\|Mm7\|chr6 (71597797-71598095)