Non-Coding RNA Search

Ss1.1-rcje02_j9.5

Sequence:


               
               GTCGGGCCTGCCCTGCTCGGTGCTCCCTGCAGAAGGCAGCCCCACTGAAGCACCTGCGCT
GCAGGCGGCCGGGGGCGAGCCAAGAAACCCACCTCTGTAGAGACACACTAGATTTCTCCA
AGGTCTCAAGAGGCACCGTCAAGAGGGGCACGGAGTGAGCTGATTCTCATCTTTTCTAGA
TGCAATAACTATGTAATGGTTAACGTAGCCAGGATGACATTGAGCATCTGCTGTGAGGGT
TTCTCATTCCTCTGAGCTGAAAATACGTACATGATTCTTGTCCCCAGGAGGAGCAGGGTT
GGGAAACCTCGTGTTTCTGGGCTGCAGGACCGTTGCAGGGAAGTACCTGCTCTCGCCAGC
ATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAAATGAAAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCGGGCCTGCCCTGCTCGGTGCTCCCTGCAGAAGGCAGCCCCACTGAAGCACCTGCGCT
GCAGGCGGCCGGGGGCGAGCCAAGAAACCCACCTCTGTAGAGACACACTAGATTTCTCCA
AGGTCTCAAGAGGCACCGTCAAGAGGGGCACGGAGTGAGCTGATTCTCATCTTTTCTAGA
TGCAATAACTATGTAATGGTTAACGTAGCCAGGATGACATTGAGCATCTGCTGTGAGGGT
TTCTCATTCCTCTGAGCTGAAAATACGTACATGATTCTTGTCCCCAGGAGGAGCAGGGTT
GGGAAACCTCGTGTTTCTGGGCTGCAGGACCGTTGCAGGGAAGTACCTGCTCTCGCCAGC
ATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAAATGAAAACT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               48-408, gnl|bosTau2|chr25 (9187044-9186674)
               

               
               48-408, gnl|Hg17|chr16 (11183114-11183491)
               

               
               48-408, gnl|Mm7|chr16 (10422067-10422379)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               48-408, gnl|bosTau2|chr25 (9187044-9186674)
               

               
               48-408, gnl|Hg17|chr16 (11183114-11183491)
               

               
               48-408, gnl|Mm7|chr16 (10422067-10422379)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cje (0.330469)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.330469)

	48-408, gnl\|bosTau2\|chr25 (9187044-9186674)
	48-408, gnl\|Hg17\|chr16 (11183114-11183491)
	48-408, gnl\|Mm7\|chr16 (10422067-10422379)