Ss1.1-rcje20_p13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCTGCTTGATCAGCTGTGGGAGTAGCCTCGTTGCCACCATGAACTTCTCCGGCAAATA CCAAGTACAGAGCCAGGAAAACTTTGAGGCCTTCATGAAGGCAGTCGGTCTGCCCGACGA ACTCATCCAGAAGGGGAAGGACATCAAGGGGACATCGGAAATCGTGCAGAATGGGAAGCA CTTCAAGTTGACCATCACTACCGGGTCCAAGGTCGTCCAGAATGAGTTCACCTTGGGAGA GGAGTGTGAGATGGAGACCCTGACTGGGGAGAAGGTCAAGACAGTGGTTCAGTTGGAAGG TGACAATAAACTGGTGACAACTTTCAAAGGCATCAAGTCTGTGACTGAACTCAACGGTGA CATAATCACCAGTACCATGACACTGGGTGACATTGTCTTCAAGAGAATCAGCAAGAGAAT TTAGACAAGTCCGCATTTCATAGTCTTATATCATGTAAAATTAATGCAATAAAGTGAACT TTCTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCTGCTTGATCAGCTGTGGGAGTAGCCTCGTTGCCACCATGAACTTCTCCGGCAAATA CCAAGTACAGAGCCAGGAAAACTTTGAGGCCTTCATGAAGGCAGTCGGTCTGCCCGACGA ACTCATCCAGAAGGGGAAGGACATCAAGGGGACATCGGAAATCGTGCAGAATGGGAAGCA CTTCAAGTTGACCATCACTACCGGGTCCAAGGTCGTCCAGAATGAGTTCACCTTGGGAGA GGAGTGTGAGATGGAGACCCTGACTGGGGAGAAGGTCAAGACAGTGGTTCAGTTGGAAGG TGACAATAAACTGGTGACAACTTTCAAAGGCATCAAGTCTGTGACTGAACTCAACGGTGA CATAATCACCAGTACCATGACACTGGGTGACATTGTCTTCAAGAGAATCAGCAAGAGAAT TTAGACAAGTCCGCATTTCATAGTCTTATATCATGTAAAATTAATGCAATAAAGTGAACT TTCTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 111-280, gnl|bosTau2|chr11 (35714255-35714086) | |
| 111-280, gnl|canFam2|chr17 (41308963-41308760) | |
| 111-280, gnl|danRer3|chr5 (61492974-61493160) | |
| 111-280, gnl|dasNov1|scaffold_35737 (44775-44977) | |
| 111-280, gnl|echTel1|scaffold_305378 (84671-84873) | |
| 111-280, gnl|fr1|chrUn (46274175-46274364) | |
| 111-280, gnl|galGal2|chr4 (86042229-86042410) | |
| 111-280, gnl|hg17|chr2 (88264952-88265155) | |
| 111-280, gnl|Hg17|chr2 (88265126-88264957) | |
| 111-280, gnl|loxAfr1|scaffold_20979 (7670-7873) | |
| 111-280, gnl|mm7|chr6 (71219788-71219588) | |
| 111-280, gnl|Mm7|chr6 (71219612-71219781) | |
| 111-280, gnl|monDom2|scaffold_63 (1228772-1228974) | |
| 111-280, gnl|oryCun1|scaffold_212935 (97503-97313) | |
| 111-280, gnl|panTro1|chr12 (91161251-91161454) | |
| 111-280, gnl|rn3|chr4 (104658421-104658218) | |
| 111-280, gnl|tetNig1|chr12 (9172678-9172865) | |
| 111-280, gnl|xenTro1|scaffold_149 (1128131-1127951) | |
| 374-497, gnl|bosTau2|chr11 (35710999-35710875) | |
| 374-497, gnl|Hg17|chr2 (88261885-88261763) | |
| 374-497, gnl|Mm7|chr6 (71222905-71223022) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 111-280, gnl|bosTau2|chr11 (35714255-35714086) | |
| 111-280, gnl|canFam2|chr17 (41308963-41308760) | |
| 111-280, gnl|danRer3|chr5 (61492974-61493160) | |
| 111-280, gnl|dasNov1|scaffold_35737 (44775-44977) | |
| 111-280, gnl|echTel1|scaffold_305378 (84671-84873) | |
| 111-280, gnl|fr1|chrUn (46274175-46274364) | |
| 111-280, gnl|galGal2|chr4 (86042229-86042410) | |
| 111-280, gnl|hg17|chr2 (88264952-88265155) | |
| 111-280, gnl|Hg17|chr2 (88265126-88264957) | |
| 111-280, gnl|loxAfr1|scaffold_20979 (7670-7873) | |
| 111-280, gnl|mm7|chr6 (71219788-71219588) | |
| 111-280, gnl|Mm7|chr6 (71219612-71219781) | |
| 111-280, gnl|monDom2|scaffold_63 (1228772-1228974) | |
| 111-280, gnl|oryCun1|scaffold_212935 (97503-97313) | |
| 111-280, gnl|panTro1|chr12 (91161251-91161454) | |
| 111-280, gnl|rn3|chr4 (104658421-104658218) | |
| 111-280, gnl|tetNig1|chr12 (9172678-9172865) | |
| 111-280, gnl|xenTro1|scaffold_149 (1128131-1127951) | |
| 374-497, gnl|bosTau2|chr11 (35710999-35710875) | |
| 374-497, gnl|Hg17|chr2 (88261885-88261763) | |
| 374-497, gnl|Mm7|chr6 (71222905-71223022) |
| Expressed library(ies): 15 entry(ies) | More info |
| Expressed library(ies): 15 entry(ies) | Help | Less info |
| cje (64.6067) | |
| duo (12.0961) | |
| col (7.21529) | |
| nje (3.65024) | |
| jej (2.57197) | |
| rec (1.7307) | |
| fli (1.42017) | |
| sin (1.04969) | |
| nco (0.808669) | |
| lin (0.436808) | |
| eje (0.395335) | |
| ill (0.351185) | |
| mas (0.210305) | |
| eli (0.151814) | |
| lun (0.150489) |
| Expressed library(ies): 15 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cje (64.6067) | |
| duo (12.0961) | |
| col (7.21529) | |
| nje (3.65024) | |
| jej (2.57197) | |
| rec (1.7307) | |
| fli (1.42017) | |
| sin (1.04969) | |
| nco (0.808669) | |
| lin (0.436808) | |
| eje (0.395335) | |
| ill (0.351185) | |
| mas (0.210305) | |
| eli (0.151814) | |
| lun (0.150489) |