Non-Coding RNA Search

Ss1.1-rcje34_i14.5

Sequence:


               
               GGGATTGAATTTTTTAGGACAAACCCAAGAGACTACGGGAGTATTTGATGTTCTGATTCT
AGCACCATATACATTCCCGCCTCTCCATTTCTTCCTTCTGACCTGGCAAGTGTAAGCCCC
TATCAGGTGTTTGTCTGTGTGATCCTTTTAACCCACATCCTGATTCTGCATCCAAGTGCT
TTGAGGCCGACTTAATAAGGATTAATTTTAACAGCTGCTGTGTGAACACAGATGCTCGCT
GCTGCTTATTTCTAATAAGTTGATCAAGCCATATAAAAAAGATTTTTCCTCCTTAAGAAG
CCACATCTTCCTATGAAGCTGTAAACCAATAAAGTACAGCTGAAATGCTTAGGACTAAAA
TTAGCGTGTTATATTTAAAGATTTGGCCTCAAACTGATTATGACATGCTTCTCTATTGAA
TTTCTAGTCAGATGCTTTTTCATAAAAAGAACGCTGATATAAATGGTCGTGTTCAAATGT
TACACCAGTCTGGCTTTGCAGTTTGACCTTTCCCAGTAGCTAAATAAATATATTTTTTTA
CCACCAAGAAAAGAATGATTTAACATTTGTGTGCTAGCAGTATGTCAATGAATTCAGAGT
CTGAATGCAACAGATGCAACCCCAGGTAGAAACATGAAAACCAACTGATGTCAAAGAGAA
ACCAAGCTACATTGTGTTAGAGGAGCAGCTCTGGAGGAAGGGATATTTTAAGTATAATAG
ACACTTAGGAAAACTAACAATTATTGTAAAGGTCGTCTGGGAAAATCATTATTAAGAATA
GCCAGGAGTTCCCGTCGTGGCGCAGTGGTTAACGAATCCGACTAGGAACCATGAGGTTGC
AGGTTCGATCCCTGCCCTTGCTCAGTGGGTTTAACGATCCGGCGTTGCTGTGAGCTGTGG
TGTAGGTTGCAGACGCGGCTCGGAGCCCACGTTGCTGTGGCTCTGGCGTAGGCTGATGGC
TACAGCTTCAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGATTGAATTTTTTAGGACAAACCCAAGAGACTACGGGAGTATTTGATGTTCTGATTCT
AGCACCATATACATTCCCGCCTCTCCATTTCTTCCTTCTGACCTGGCAAGTGTAAGCCCC
TATCAGGTGTTTGTCTGTGTGATCCTTTTAACCCACATCCTGATTCTGCATCCAAGTGCT
TTGAGGCCGACTTAATAAGGATTAATTTTAACAGCTGCTGTGTGAACACAGATGCTCGCT
GCTGCTTATTTCTAATAAGTTGATCAAGCCATATAAAAAAGATTTTTCCTCCTTAAGAAG
CCACATCTTCCTATGAAGCTGTAAACCAATAAAGTACAGCTGAAATGCTTAGGACTAAAA
TTAGCGTGTTATATTTAAAGATTTGGCCTCAAACTGATTATGACATGCTTCTCTATTGAA
TTTCTAGTCAGATGCTTTTTCATAAAAAGAACGCTGATATAAATGGTCGTGTTCAAATGT
TACACCAGTCTGGCTTTGCAGTTTGACCTTTCCCAGTAGCTAAATAAATATATTTTTTTA
CCACCAAGAAAAGAATGATTTAACATTTGTGTGCTAGCAGTATGTCAATGAATTCAGAGT
CTGAATGCAACAGATGCAACCCCAGGTAGAAACATGAAAACCAACTGATGTCAAAGAGAA
ACCAAGCTACATTGTGTTAGAGGAGCAGCTCTGGAGGAAGGGATATTTTAAGTATAATAG
ACACTTAGGAAAACTAACAATTATTGTAAAGGTCGTCTGGGAAAATCATTATTAAGAATA
GCCAGGAGTTCCCGTCGTGGCGCAGTGGTTAACGAATCCGACTAGGAACCATGAGGTTGC
AGGTTCGATCCCTGCCCTTGCTCAGTGGGTTTAACGATCCGGCGTTGCTGTGAGCTGTGG
TGTAGGTTGCAGACGCGGCTCGGAGCCCACGTTGCTGTGGCTCTGGCGTAGGCTGATGGC
TACAGCTTCAAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-732, gnl|bosTau2|chr1 (5137319-5136601)
               

               
               1-732, gnl|Hg17|chr21 (26442045-26441327)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-732, gnl|bosTau2|chr1 (5137319-5136601)
               

               
               1-732, gnl|Hg17|chr21 (26442045-26441327)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cje (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)

	1-732, gnl\|bosTau2\|chr1 (5137319-5136601)
	1-732, gnl\|Hg17\|chr21 (26442045-26441327)