Ss1.1-rcki012_e21.5
|
GCGGGGCGGTGGGGTTAGATCCTGGCTAGGGGCGGAGCTGGGCGATGGCGTCCCGAGCGG
CTCGCTGGCTGGCGTTGGCACCTGTCCGGTTTGGGGCTTTCCGGAGCGGGCTGAGCCTGA
GGAAAGGGGGTGATGTCGCTGCCGGACAGGGCCACCCAGGTCGGAATCTGGTACCGTCGA
GGTCAGTCATCGTTACTCGCAGCGGCGCCATTTTGCCTAAACCGGTGAAAATGTCCTTCG
GCCTCCTCCGCGTGTTCTCCATCGTGATCCCCTTTCTCTACGTCGGGACGCTCATCAGCA
AGAACTTTGCTGCTCTCCTTGAAGAACATGACATCTTCGTTCCAGAGGATGACGATGACG
ACGACTAACAGGGTATGGACACAGTGCAGAATGGACAAAGCCCTAACTTAAGAAGCAGTG
ATGCTCACGGCCTCTCCTCCTTCCTGTCGTATCAGCAGATGGGCCCAGGGCAAGCCCTCA
ACCTCCTGACCCCACATGGTCGGTGACCACAGGCCAGATTGCCAGGCTCTGGGAGGTTCG
CAGAGATACGCTGTCCCCTGGGCATAATCAAATTATAAATAAATATAGTGAACATCAGCT
CTGTAAAAAAAAGTGATGGCTGAAGTTTCTCAACACAAGCAGGTTCTAGCAGTTTCTTGT
CCCTGCTATCCTCTCTCTCTTACCAGCTGACATACAAGTCACCCCTGTGGATCCACAAAG
CAATTATGGGAACCTGGGAACAATTTTCTTTGTTTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGGGCGGTGGGGTTAGATCCTGGCTAGGGGCGGAGCTGGGCGATGGCGTCCCGAGCGG
CTCGCTGGCTGGCGTTGGCACCTGTCCGGTTTGGGGCTTTCCGGAGCGGGCTGAGCCTGA
GGAAAGGGGGTGATGTCGCTGCCGGACAGGGCCACCCAGGTCGGAATCTGGTACCGTCGA
GGTCAGTCATCGTTACTCGCAGCGGCGCCATTTTGCCTAAACCGGTGAAAATGTCCTTCG
GCCTCCTCCGCGTGTTCTCCATCGTGATCCCCTTTCTCTACGTCGGGACGCTCATCAGCA
AGAACTTTGCTGCTCTCCTTGAAGAACATGACATCTTCGTTCCAGAGGATGACGATGACG
ACGACTAACAGGGTATGGACACAGTGCAGAATGGACAAAGCCCTAACTTAAGAAGCAGTG
ATGCTCACGGCCTCTCCTCCTTCCTGTCGTATCAGCAGATGGGCCCAGGGCAAGCCCTCA
ACCTCCTGACCCCACATGGTCGGTGACCACAGGCCAGATTGCCAGGCTCTGGGAGGTTCG
CAGAGATACGCTGTCCCCTGGGCATAATCAAATTATAAATAAATATAGTGAACATCAGCT
CTGTAAAAAAAAGTGATGGCTGAAGTTTCTCAACACAAGCAGGTTCTAGCAGTTTCTTGT
CCCTGCTATCCTCTCTCTCTTACCAGCTGACATACAAGTCACCCCTGTGGATCCACAAAG
CAATTATGGGAACCTGGGAACAATTTTCTTTGTTTC
|
|
1-244, gnl|bosTau2|chr5 (68512990-68513236) |
|
1-244, gnl|Hg17|chr22 (40800225-40800472) |
|
1-244, gnl|Mm7|chr15 (82430441-82430678) |
| |
|
369-678, gnl|bosTau2|chr5 (68516445-68516761) |
|
369-678, gnl|canFam2|chr10 (26357815-26357537) |
|
369-678, gnl|dasNov1|scaffold_10243 (18918-19172) |
|
369-678, gnl|echTel1|scaffold_294971 (8626-8912) |
|
369-678, gnl|hg17|chr22 (40803599-40803877) |
|
369-678, gnl|Hg17|chr22 (40803620-40803940) |
|
369-678, gnl|loxAfr1|scaffold_16412 (7566-7274) |
|
369-678, gnl|mm7|chr15 (82433214-82433465) |
|
369-678, gnl|Mm7|chr15 (82433235-82433519) |
|
369-678, gnl|panTro1|chr23_random (12782204-12782483) |
|
369-678, gnl|rheMac2|chr10 (86051901-86052179) |
|
369-678, gnl|rn3|chr7 (120758915-120759167) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-244, gnl|bosTau2|chr5 (68512990-68513236) |
|
1-244, gnl|Hg17|chr22 (40800225-40800472) |
|
1-244, gnl|Mm7|chr15 (82430441-82430678) |
| |
|
369-678, gnl|bosTau2|chr5 (68516445-68516761) |
|
369-678, gnl|canFam2|chr10 (26357815-26357537) |
|
369-678, gnl|dasNov1|scaffold_10243 (18918-19172) |
|
369-678, gnl|echTel1|scaffold_294971 (8626-8912) |
|
369-678, gnl|hg17|chr22 (40803599-40803877) |
|
369-678, gnl|Hg17|chr22 (40803620-40803940) |
|
369-678, gnl|loxAfr1|scaffold_16412 (7566-7274) |
|
369-678, gnl|mm7|chr15 (82433214-82433465) |
|
369-678, gnl|Mm7|chr15 (82433235-82433519) |
|
369-678, gnl|panTro1|chr23_random (12782204-12782483) |
|
369-678, gnl|rheMac2|chr10 (86051901-86052179) |
|
369-678, gnl|rn3|chr7 (120758915-120759167) |
|
hlv (0.974795) |
|
che (0.408942) |
|
nlu (0.383362) |
|
sin (0.349895) |
|
cag (0.302389) |
|
eje (0.296501) |
|
ssp (0.271039) |
|
cov (0.264306) |
|
nms (0.213858) |
|
mas (0.210305) |
|
hea (0.204499) |
|
col (0.195008) |
|
ton (0.1755) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
csp (0.161186) |
|
cli (0.152812) |
|
fat (0.147427) |
|
pty (0.142714) |
|
cst (0.140036) |
|
pla (0.133672) |
|
ute (0.132784) |
|
med (0.116252) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
hlv (0.974795) |
|
che (0.408942) |
|
nlu (0.383362) |
|
sin (0.349895) |
|
cag (0.302389) |
|
eje (0.296501) |
|
ssp (0.271039) |
|
cov (0.264306) |
|
nms (0.213858) |
|
mas (0.210305) |
|
hea (0.204499) |
|
col (0.195008) |
|
ton (0.1755) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
cki (0.165235) |
|
csp (0.161186) |
|
cli (0.152812) |
|
fat (0.147427) |
|
pty (0.142714) |
|
cst (0.140036) |
|
pla (0.133672) |
|
ute (0.132784) |
|
med (0.116252) |
|
ecc (0.115035) |
|
jca (0.11396) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
