Ss1.1-rcki016_e18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCACGCGTCCGAGAAGTGCTTACAAGGAAAATGAAGCTCCCTATTTTCATAGCAGATGCA TTCACAGCAAAAGCATTTCGTGGGAATCCTGCTGCTGTTTGCCTCCTACAAAATAAATTG GATGAAGACATGCATCAAAAAGTTGCAAGGGAAATGAACCTCTCTGAAACTGCTTTTATC CGAAAATTACACCCAACTGACAACTTTACACAGAAAAACGTGCATAGCACTCTAACCTTT GTCACTCTGAGTGGGGAACTAAAGCATACGGAGTTCGAGGATGGTATCATCCTGGACCTG CCTCTTTATCCAGCCCAACCCCAGGACTTCCCTGAAGTGGAGGACTTGATAAAGACAGCC ATAGGTGACACACTGGTTCAGGACGTCCGCTATTCTCCAGATACCCAGAAGCTCCTTGTC CCGCTCAGTGATATTTACGACAGGTCATTTCTGGAGAACCTGAGAGTGAACACACAGAAT CTGCTGCAAGTGGACAACACAGGGAAGGTGAAAGGACTCATTCTCACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCACGCGTCCGAGAAGTGCTTACAAGGAAAATGAAGCTCCCTATTTTCATAGCAGATGCA TTCACAGCAAAAGCATTTCGTGGGAATCCTGCTGCTGTTTGCCTCCTACAAAATAAATTG GATGAAGACATGCATCAAAAAGTTGCAAGGGAAATGAACCTCTCTGAAACTGCTTTTATC CGAAAATTACACCCAACTGACAACTTTACACAGAAAAACGTGCATAGCACTCTAACCTTT GTCACTCTGAGTGGGGAACTAAAGCATACGGAGTTCGAGGATGGTATCATCCTGGACCTG CCTCTTTATCCAGCCCAACCCCAGGACTTCCCTGAAGTGGAGGACTTGATAAAGACAGCC ATAGGTGACACACTGGTTCAGGACGTCCGCTATTCTCCAGATACCCAGAAGCTCCTTGTC CCGCTCAGTGATATTTACGACAGGTCATTTCTGGAGAACCTGAGAGTGAACACACAGAAT CTGCTGCAAGTGGACAACACAGGGAAGGTGAAAGGACTCATTCTCACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 46 entry(ies) | More info |
| Aligned organism(s): 46 entry(ies) | Help | Less info |
| 83-212, gnl|bosTau2|chr28 (16976889-16977018) | |
| 83-212, gnl|canFam2|chr4 (22731419-22731333) | |
| 83-212, gnl|dasNov1|scaffold_74847 (9155-9053) | |
| 83-212, gnl|Hg17|chr10 (69726780-69726651) | |
| 83-212, gnl|hg17|chrX (26123096-26123195) | |
| 83-212, gnl|loxAfr1|scaffold_9793 (77461-77370) | |
| 83-212, gnl|mm7|chr10 (62584574-62584673) | |
| 83-212, gnl|Mm7|chr10 (62566220-62566352) | |
| 83-212, gnl|oryCun1|scaffold_208100 (40686-40786) | |
| 83-212, gnl|panTro1|chrX (26970728-26970827) | |
| 83-212, gnl|rheMac2|chrX (24182087-24182186) | |
| 83-212, gnl|rn3|chr20 (25432518-25432608) | |
| 215-325, gnl|bosTau2|chr28 (16982798-16982908) | |
| 215-325, gnl|canFam2|chr4 (22727804-22728038) | |
| 215-325, gnl|danRer3|chrUn (155056872-155056626) | |
| 215-325, gnl|echTel1|scaffold_310064 (2809-3045) | |
| 215-325, gnl|hg17|chr10 (69721768-69722005) | |
| 215-325, gnl|Hg17|chr10 (69722001-69721891) | |
| 215-325, gnl|loxAfr1|scaffold_32273 (17966-18201) | |
| 215-325, gnl|mm7|chr10 (62571252-62570986) | |
| 215-325, gnl|Mm7|chr10 (62570988-62571098) | |
| 215-325, gnl|monDom2|scaffold_67 (9329424-9329658) | |
| 215-325, gnl|oryCun1|scaffold_202524 (45851-45614) | |
| 215-325, gnl|panTro1|chr8 (70750608-70750845) | |
| 215-325, gnl|rheMac2|chr9 (68955843-68955606) | |
| 215-325, gnl|rn3|chr20 (25417122-25416856) | |
| 416-528, gnl|bosTau2|chr28 (16985383-16985497) | |
| 416-528, gnl|canFam2|chr4 (22724977-22725089) | |
| 416-528, gnl|canFam2|chrX (21682688-21682804) | |
| 416-528, gnl|fr1|chrUn (268128567-268128479) | |
| 416-528, gnl|galGal2|chr6 (9869832-9869920) | |
| 416-528, gnl|hg17|chr10 (69718341-69718454) | |
| 416-528, gnl|Hg17|chr10 (69718454-69718340) | |
| 416-528, gnl|hg17|chrX (26123772-26123887) | |
| 416-528, gnl|loxAfr1|scaffold_32273 (14482-14594) | |
| 416-528, gnl|loxAfr1|scaffold_32273 (14551-14445) | |
| 416-528, gnl|mm7|chr10 (62573199-62573086) | |
| 416-528, gnl|Mm7|chr10 (62573084-62573198) | |
| 416-528, gnl|oryCun1|scaffold_202524 (48476-48363) | |
| 416-528, gnl|oryCun1|scaffold_208100 (41000-41190) | |
| 416-528, gnl|panTro1|chr8 (70747144-70747257) | |
| 416-528, gnl|panTro1|chrX (26971505-26971620) | |
| 416-528, gnl|rheMac2|chr9 (68958650-68958537) | |
| 416-528, gnl|rheMac2|chrX (24182454-24182569) | |
| 416-528, gnl|rn3|chr20 (25419352-25419239) | |
| 416-528, gnl|tetNig1|chr5 (3690763-3690579) |
| Aligned organism(s): 46 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 83-212, gnl|bosTau2|chr28 (16976889-16977018) | |
| 83-212, gnl|canFam2|chr4 (22731419-22731333) | |
| 83-212, gnl|dasNov1|scaffold_74847 (9155-9053) | |
| 83-212, gnl|Hg17|chr10 (69726780-69726651) | |
| 83-212, gnl|hg17|chrX (26123096-26123195) | |
| 83-212, gnl|loxAfr1|scaffold_9793 (77461-77370) | |
| 83-212, gnl|mm7|chr10 (62584574-62584673) | |
| 83-212, gnl|Mm7|chr10 (62566220-62566352) | |
| 83-212, gnl|oryCun1|scaffold_208100 (40686-40786) | |
| 83-212, gnl|panTro1|chrX (26970728-26970827) | |
| 83-212, gnl|rheMac2|chrX (24182087-24182186) | |
| 83-212, gnl|rn3|chr20 (25432518-25432608) | |
| 215-325, gnl|bosTau2|chr28 (16982798-16982908) | |
| 215-325, gnl|canFam2|chr4 (22727804-22728038) | |
| 215-325, gnl|danRer3|chrUn (155056872-155056626) | |
| 215-325, gnl|echTel1|scaffold_310064 (2809-3045) | |
| 215-325, gnl|hg17|chr10 (69721768-69722005) | |
| 215-325, gnl|Hg17|chr10 (69722001-69721891) | |
| 215-325, gnl|loxAfr1|scaffold_32273 (17966-18201) | |
| 215-325, gnl|mm7|chr10 (62571252-62570986) | |
| 215-325, gnl|Mm7|chr10 (62570988-62571098) | |
| 215-325, gnl|monDom2|scaffold_67 (9329424-9329658) | |
| 215-325, gnl|oryCun1|scaffold_202524 (45851-45614) | |
| 215-325, gnl|panTro1|chr8 (70750608-70750845) | |
| 215-325, gnl|rheMac2|chr9 (68955843-68955606) | |
| 215-325, gnl|rn3|chr20 (25417122-25416856) | |
| 416-528, gnl|bosTau2|chr28 (16985383-16985497) | |
| 416-528, gnl|canFam2|chr4 (22724977-22725089) | |
| 416-528, gnl|canFam2|chrX (21682688-21682804) | |
| 416-528, gnl|fr1|chrUn (268128567-268128479) | |
| 416-528, gnl|galGal2|chr6 (9869832-9869920) | |
| 416-528, gnl|hg17|chr10 (69718341-69718454) | |
| 416-528, gnl|Hg17|chr10 (69718454-69718340) | |
| 416-528, gnl|hg17|chrX (26123772-26123887) | |
| 416-528, gnl|loxAfr1|scaffold_32273 (14482-14594) | |
| 416-528, gnl|loxAfr1|scaffold_32273 (14551-14445) | |
| 416-528, gnl|mm7|chr10 (62573199-62573086) | |
| 416-528, gnl|Mm7|chr10 (62573084-62573198) | |
| 416-528, gnl|oryCun1|scaffold_202524 (48476-48363) | |
| 416-528, gnl|oryCun1|scaffold_208100 (41000-41190) | |
| 416-528, gnl|panTro1|chr8 (70747144-70747257) | |
| 416-528, gnl|panTro1|chrX (26971505-26971620) | |
| 416-528, gnl|rheMac2|chr9 (68958650-68958537) | |
| 416-528, gnl|rheMac2|chrX (24182454-24182569) | |
| 416-528, gnl|rn3|chr20 (25419352-25419239) | |
| 416-528, gnl|tetNig1|chr5 (3690763-3690579) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| cst (0.140036) |