Non-Coding RNA Search

Ss1.1-rcki04_f13.5

Sequence:


               
               TCCTCAGGAAAGCTGGAAGACCTTGACTGTCAAAACCATCCTTCTGAACCTCTCTGCCCA
ACCCCCTTTTCTGGTCATGGGCCTTAAAAGGAGACTTTGATCAGTGCGCACCCCAAGGGC
CCAGGGGAGCAGAGGGACCCACCTCATCCCACTGTCACCTTCAGAAGTCTGTGAAGCCCA
CATCCACCTCCTCTGTCTGACTGGGGTTTCTTTCTGGGCCCGCAGAGAGGGGCTCTTCCT
TGCCCTCGGTGCTGGCTTTAGTCACAACGCCTCCAAAGACATGGAACCCAGGCTAACAAT
GGTCCCAACTGCGAATTTTCTCCTCTCATGTTGCTTTCTAAAAGCAGTTGTTATACTGTT
CATAACATTGTATAGTTTAATTTCATGTCATTTTGGATCTTATATAAAAACGTGAGAATC
TGGATTTTTAAAAAGAATGACTCCATTTTAGATAGCCCCTTTTGATGTTAATTTATAGTG
AGTCCAATGTATGCTTTAGAAGTAAAGACATTGACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTCAGGAAAGCTGGAAGACCTTGACTGTCAAAACCATCCTTCTGAACCTCTCTGCCCA
ACCCCCTTTTCTGGTCATGGGCCTTAAAAGGAGACTTTGATCAGTGCGCACCCCAAGGGC
CCAGGGGAGCAGAGGGACCCACCTCATCCCACTGTCACCTTCAGAAGTCTGTGAAGCCCA
CATCCACCTCCTCTGTCTGACTGGGGTTTCTTTCTGGGCCCGCAGAGAGGGGCTCTTCCT
TGCCCTCGGTGCTGGCTTTAGTCACAACGCCTCCAAAGACATGGAACCCAGGCTAACAAT
GGTCCCAACTGCGAATTTTCTCCTCTCATGTTGCTTTCTAAAAGCAGTTGTTATACTGTT
CATAACATTGTATAGTTTAATTTCATGTCATTTTGGATCTTATATAAAAACGTGAGAATC
TGGATTTTTAAAAAGAATGACTCCATTTTAGATAGCCCCTTTTGATGTTAATTTATAGTG
AGTCCAATGTATGCTTTAGAAGTAAAGACATTGACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-516, gnl|bosTau2|chr18 (22841938-22841412)
               

               
               3-516, gnl|Hg17|chr16 (56586614-56586089)
               

               
               3-516, gnl|Mm7|chr8 (93915699-93915186)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-516, gnl|bosTau2|chr18 (22841938-22841412)
               

               
               3-516, gnl|Hg17|chr16 (56586614-56586089)
               

               
               3-516, gnl|Mm7|chr8 (93915699-93915186)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cki (0.165235)
               

               
               spl (0.143184)
               

               
               lnt (0.142308)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)
               

               
               spl (0.143184)
               

               
               lnt (0.142308)

	3-516, gnl\|bosTau2\|chr18 (22841938-22841412)
	3-516, gnl\|Hg17\|chr16 (56586614-56586089)
	3-516, gnl\|Mm7\|chr8 (93915699-93915186)