Non-Coding RNA Search

Ss1.1-rcki07_h10.5

Sequence:


               
               CGCGCTCCCGGCGCGAGCGGTGACGCGACGCGAGTGGGGGCCGAGCGGCGGTGGGGCTCT
CGGAAAGGAGCCGAGCTTCTGGGAAGCCGCCCCCGGGAAGCCGCGTCCGCGTTGCCGGCG
CTGCCTCGCTGCGGTGGCGGTGATGCGCTCCGCCGGTGGATACCCGCTGCCGGGAGCCGA
GACCGACAAGTCGGACGCTGCCAAGCAGCAGGAGGAACAGGAGGGCTCTAATGCCAGGAC
TTCCGTAATGGTGCATGAGGACTGACTCCCAGTACCCTGCCTGACCTCTGACCCATCAGC
ATGGGGAGGATCGGCATCTCCTGTCTTTTCCCTGCTTCCTGGCATTTCAGCATCTCTCCA
GTGGGGTGCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGCTCCCGGCGCGAGCGGTGACGCGACGCGAGTGGGGGCCGAGCGGCGGTGGGGCTCT
CGGAAAGGAGCCGAGCTTCTGGGAAGCCGCCCCCGGGAAGCCGCGTCCGCGTTGCCGGCG
CTGCCTCGCTGCGGTGGCGGTGATGCGCTCCGCCGGTGGATACCCGCTGCCGGGAGCCGA
GACCGACAAGTCGGACGCTGCCAAGCAGCAGGAGGAACAGGAGGGCTCTAATGCCAGGAC
TTCCGTAATGGTGCATGAGGACTGACTCCCAGTACCCTGCCTGACCTCTGACCCATCAGC
ATGGGGAGGATCGGCATCTCCTGTCTTTTCCCTGCTTCCTGGCATTTCAGCATCTCTCCA
GTGGGGTGCCCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-208, gnl|bosTau2|chr8 (37479743-37479953)
               


               
               215-371, gnl|bosTau2|chr22 (37542246-37542087)
               

               
               215-371, gnl|Hg17|chr8 (23363461-23362335)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-208, gnl|bosTau2|chr8 (37479743-37479953)
               


               
               215-371, gnl|bosTau2|chr22 (37542246-37542087)
               

               
               215-371, gnl|Hg17|chr8 (23363461-23362335)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               nep (0.183925)
               

               
               cki (0.165235)
               

               
               cly (0.120642)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               cki (0.165235)
               

               
               cly (0.120642)

	1-208, gnl\|bosTau2\|chr8 (37479743-37479953)

	215-371, gnl\|bosTau2\|chr22 (37542246-37542087)
	215-371, gnl\|Hg17\|chr8 (23363461-23362335)