Ss1.1-rcki22_c23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCGGCTGGCTCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCG TGCGCTTACTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCTG TCACCAAGTACACCAGCTCCAAATAAGATTTTAAGGAGGACCAAATGGACTTTAGAAATC TATTTTCCCACCTCCATTTACTGCTGGACACTGTTGCATCTCACAAATAAGTCAGGAAAA ATGACTGGTCCTAGAAGAAGATAAAATATTTTTAACAGTCATGGAAGGATCAATAAGAAC TTGGCTAACATTTATTTTAAGTATAAAAAAATGTTCATTGTAGAAATTTGTAAAAAGAGA AATATATAAAACAGAATAATAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCGGCTGGCTCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCG TGCGCTTACTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCTG TCACCAAGTACACCAGCTCCAAATAAGATTTTAAGGAGGACCAAATGGACTTTAGAAATC TATTTTCCCACCTCCATTTACTGCTGGACACTGTTGCATCTCACAAATAAGTCAGGAAAA ATGACTGGTCCTAGAAGAAGATAAAATATTTTTAACAGTCATGGAAGGATCAATAAGAAC TTGGCTAACATTTATTTTAAGTATAAAAAAATGTTCATTGTAGAAATTTGTAAAAAGAGA AATATATAAAACAGAATAATAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 1-146, gnl|bosTau2|chr3 (62478195-62478050) | |
| 1-146, gnl|canFam2|chr35 (27083267-27082874) | |
| 1-146, gnl|canFam2|chr35 (27082876-27083268) | |
| 1-146, gnl|danRer3|chr11 (30646633-30647018) | |
| 1-146, gnl|danRer3|chr11 (30638295-30637914) | |
| 1-146, gnl|dasNov1|scaffold_18013 (7903-7515) | |
| 1-146, gnl|dasNov1|scaffold_181949 (555-947) | |
| 1-146, gnl|echTel1|scaffold_249820 (6035-5642) | |
| 1-146, gnl|echTel1|scaffold_53110 (189-582) | |
| 1-146, gnl|fr1|chrUn (311249524-311249142) | |
| 1-146, gnl|fr1|chrUn (311249142-311249524) | |
| 1-146, gnl|galGal2|chr1 (44824562-44824177) | |
| 1-146, gnl|galGal2|chrUn (70550149-70549758) | |
| 1-146, gnl|hg17|chr21 (43809545-43809938) | |
| 1-146, gnl|hg17|chr3 (115304780-115305171) | |
| 1-146, gnl|Hg17|chr6 (27891036-27891181) | |
| 1-146, gnl|loxAfr1|scaffold_16173 (32439-32832) | |
| 1-146, gnl|loxAfr1|scaffold_6463 (14214-13825) | |
| 1-146, gnl|mm7|chr13 (23050032-23050424) | |
| 1-146, gnl|mm7|chr13 (21402264-21401873) | |
| 1-146, gnl|Mm7|chr13 (21088322-21088467) | |
| 1-146, gnl|monDom2|scaffold_44 (2960404-2960790) | |
| 1-146, gnl|monDom2|scaffold_44 (2960790-2960403) | |
| 1-146, gnl|oryCun1|scaffold_100263 (3931-4322) | |
| 1-146, gnl|oryCun1|scaffold_166723 (3254-3638) | |
| 1-146, gnl|panTro1|chr2 (117007950-117008343) | |
| 1-146, gnl|panTro1|chr5 (27700816-27700423) | |
| 1-146, gnl|rheMac2|chr2 (34112198-34112574) | |
| 1-146, gnl|rheMac2|chr4 (26913425-26913032) | |
| 1-146, gnl|rn3|chr17 (50390036-50389645) | |
| 1-146, gnl|rn3|chr17 (50389645-50390037) | |
| 1-146, gnl|tetNig1|chrUn_random (134559075-134558695) | |
| 1-146, gnl|tetNig1|chrUn_random (134152769-134153145) | |
| 1-146, gnl|xenTro1|scaffold_450 (689292-689675) | |
| 1-146, gnl|xenTro1|scaffold_805 (426223-426613) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-146, gnl|bosTau2|chr3 (62478195-62478050) | |
| 1-146, gnl|canFam2|chr35 (27083267-27082874) | |
| 1-146, gnl|canFam2|chr35 (27082876-27083268) | |
| 1-146, gnl|danRer3|chr11 (30646633-30647018) | |
| 1-146, gnl|danRer3|chr11 (30638295-30637914) | |
| 1-146, gnl|dasNov1|scaffold_18013 (7903-7515) | |
| 1-146, gnl|dasNov1|scaffold_181949 (555-947) | |
| 1-146, gnl|echTel1|scaffold_249820 (6035-5642) | |
| 1-146, gnl|echTel1|scaffold_53110 (189-582) | |
| 1-146, gnl|fr1|chrUn (311249524-311249142) | |
| 1-146, gnl|fr1|chrUn (311249142-311249524) | |
| 1-146, gnl|galGal2|chr1 (44824562-44824177) | |
| 1-146, gnl|galGal2|chrUn (70550149-70549758) | |
| 1-146, gnl|hg17|chr21 (43809545-43809938) | |
| 1-146, gnl|hg17|chr3 (115304780-115305171) | |
| 1-146, gnl|Hg17|chr6 (27891036-27891181) | |
| 1-146, gnl|loxAfr1|scaffold_16173 (32439-32832) | |
| 1-146, gnl|loxAfr1|scaffold_6463 (14214-13825) | |
| 1-146, gnl|mm7|chr13 (23050032-23050424) | |
| 1-146, gnl|mm7|chr13 (21402264-21401873) | |
| 1-146, gnl|Mm7|chr13 (21088322-21088467) | |
| 1-146, gnl|monDom2|scaffold_44 (2960404-2960790) | |
| 1-146, gnl|monDom2|scaffold_44 (2960790-2960403) | |
| 1-146, gnl|oryCun1|scaffold_100263 (3931-4322) | |
| 1-146, gnl|oryCun1|scaffold_166723 (3254-3638) | |
| 1-146, gnl|panTro1|chr2 (117007950-117008343) | |
| 1-146, gnl|panTro1|chr5 (27700816-27700423) | |
| 1-146, gnl|rheMac2|chr2 (34112198-34112574) | |
| 1-146, gnl|rheMac2|chr4 (26913425-26913032) | |
| 1-146, gnl|rn3|chr17 (50390036-50389645) | |
| 1-146, gnl|rn3|chr17 (50389645-50390037) | |
| 1-146, gnl|tetNig1|chrUn_random (134559075-134558695) | |
| 1-146, gnl|tetNig1|chrUn_random (134152769-134153145) | |
| 1-146, gnl|xenTro1|scaffold_450 (689292-689675) | |
| 1-146, gnl|xenTro1|scaffold_805 (426223-426613) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.660939) | |
| cje (0.165235) | |
| cbl (0.114797) |