Ss1.1-rcki23_j7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTCAGCTTTTACGAGAGCTGCCAGACAGTGTCTGTTCACGTTCTCCAGATACCAGGGGC GCCCTGACAAAGTTAAGGTCAAGTTAGTGTCTTATCTTGGGTAGCTCAAAATTACCGCAT CGCGTCCGGGCGCTGCGCGGAAAGCTACCACTCGCGGAGCTGCCGGCAGTGCCCGGAGGG TCTACTGAGCTCCCTGCGCTTCGAGTGGGGCCGCGCCAGCAAGGACAAGGCCACAGCTCT GGGATCTTCACGTGGCCCCCCAACGGTCCCGGAAAAAGCGCTGTCCCTACACGAAGTATC AGATCCGCGAACTGGAACGCGAGTTTTTCTTTAACGTGTACATAAACAAAGAGAAAAGAC TCCAACTCTCTCGGATGCTCAACCTCACTGACCGGCAAGTCAAAATCTGGTTCCAGAATC GCAGGATGAAAGAAAAGAAACTGAACAGAGACCGTCTGCAGTATTTCACTGGAAACCCCT TATTTTGAGAGCTCCAGGAAGCACCCCTCTCCCCTGAGCCCCACTCACCCACTGTCCTCC CCACCAGCCTGTCCTGGGCAGGCCCAATGTCCTTGGGTTTAATGACGCCTCTTCTCTGTG GAACTCCACGATTCCTTCCCACGGTCAACTCGGGACCTCCCAGCGACCACTGCAGCCTGC GGACGAGGTCGGGGACTTGGCCGAACGGATCCTAATAAGGGGAAAATGGTAAATGCAAAT GTCCCTTTACAATTTTACCGCCAATGCACTGTTGTTCTCCCTTCCTCTCTCTGAGTTCCC TGGGGACGCTGTGGGATCTGTTGAGCTAGGCCGAGGGGCTGGAAGGCGCTTGTTTTTGTT CTGAGTTTAAGGGACCCCATCCTTTCCCCTTGGTGAACACAGATTATTTAAACTCCTGGA AATGTACCTTTGGTCTGTCATATCAAGGCACGAGTCACTGTCTTTTGTGTGAATAAATGG TTTCTAGTAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTCAGCTTTTACGAGAGCTGCCAGACAGTGTCTGTTCACGTTCTCCAGATACCAGGGGC GCCCTGACAAAGTTAAGGTCAAGTTAGTGTCTTATCTTGGGTAGCTCAAAATTACCGCAT CGCGTCCGGGCGCTGCGCGGAAAGCTACCACTCGCGGAGCTGCCGGCAGTGCCCGGAGGG TCTACTGAGCTCCCTGCGCTTCGAGTGGGGCCGCGCCAGCAAGGACAAGGCCACAGCTCT GGGATCTTCACGTGGCCCCCCAACGGTCCCGGAAAAAGCGCTGTCCCTACACGAAGTATC AGATCCGCGAACTGGAACGCGAGTTTTTCTTTAACGTGTACATAAACAAAGAGAAAAGAC TCCAACTCTCTCGGATGCTCAACCTCACTGACCGGCAAGTCAAAATCTGGTTCCAGAATC GCAGGATGAAAGAAAAGAAACTGAACAGAGACCGTCTGCAGTATTTCACTGGAAACCCCT TATTTTGAGAGCTCCAGGAAGCACCCCTCTCCCCTGAGCCCCACTCACCCACTGTCCTCC CCACCAGCCTGTCCTGGGCAGGCCCAATGTCCTTGGGTTTAATGACGCCTCTTCTCTGTG GAACTCCACGATTCCTTCCCACGGTCAACTCGGGACCTCCCAGCGACCACTGCAGCCTGC GGACGAGGTCGGGGACTTGGCCGAACGGATCCTAATAAGGGGAAAATGGTAAATGCAAAT GTCCCTTTACAATTTTACCGCCAATGCACTGTTGTTCTCCCTTCCTCTCTCTGAGTTCCC TGGGGACGCTGTGGGATCTGTTGAGCTAGGCCGAGGGGCTGGAAGGCGCTTGTTTTTGTT CTGAGTTTAAGGGACCCCATCCTTTCCCCTTGGTGAACACAGATTATTTAAACTCCTGGA AATGTACCTTTGGTCTGTCATATCAAGGCACGAGTCACTGTCTTTTGTGTGAATAAATGG TTTCTAGTAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-252, gnl|bosTau2|chr2 (17062990-17062739) | |
| 1-252, gnl|Hg17|chr2 (176794610-176794861) | |
| 1-252, gnl|Mm7|chr2 (74523274-74523525) | |
| 260-503, gnl|bosTau2|chr4 (40159267-40159510) | |
| 260-503, gnl|canFam2|chr36 (22943534-22943783) | |
| 260-503, gnl|danRer3|chr19 (21679404-21679629) | |
| 260-503, gnl|dasNov1|scaffold_49325 (11062-10822) | |
| 260-503, gnl|echTel1|scaffold_311028 (61070-61321) | |
| 260-503, gnl|fr1|chrUn (24336301-24336058) | |
| 260-503, gnl|galGal2|chr7 (17102265-17102037) | |
| 260-503, gnl|hg17|chr2 (176799151-176799401) | |
| 260-503, gnl|Hg17|chr7 (26995883-26995642) | |
| 260-503, gnl|loxAfr1|scaffold_9144 (16182-15932) | |
| 260-503, gnl|mm7|chr2 (74527628-74527878) | |
| 260-503, gnl|Mm7|chr6 (52206957-52206715) | |
| 260-503, gnl|monDom2|scaffold_2 (76068593-76068850) | |
| 260-503, gnl|oryCun1|scaffold_200437 (126705-126945) | |
| 260-503, gnl|panTro1|chr13 (66451803-66452053) | |
| 260-503, gnl|rheMac2|chr12 (39750165-39750404) | |
| 260-503, gnl|rn3|chr3 (57194477-57194727) | |
| 260-503, gnl|tetNig1|chr2 (11105194-11104971) | |
| 260-503, gnl|xenTro1|scaffold_353 (604168-604417) | |
| 267-445, gnl|bosTau2|chr19 (31239632-31239454) | |
| 267-445, gnl|Hg17|chr17 (44055461-44055283) | |
| 267-445, gnl|Mm7|chr11 (96383698-96383876) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-252, gnl|bosTau2|chr2 (17062990-17062739) | |
| 1-252, gnl|Hg17|chr2 (176794610-176794861) | |
| 1-252, gnl|Mm7|chr2 (74523274-74523525) | |
| 260-503, gnl|bosTau2|chr4 (40159267-40159510) | |
| 260-503, gnl|canFam2|chr36 (22943534-22943783) | |
| 260-503, gnl|danRer3|chr19 (21679404-21679629) | |
| 260-503, gnl|dasNov1|scaffold_49325 (11062-10822) | |
| 260-503, gnl|echTel1|scaffold_311028 (61070-61321) | |
| 260-503, gnl|fr1|chrUn (24336301-24336058) | |
| 260-503, gnl|galGal2|chr7 (17102265-17102037) | |
| 260-503, gnl|hg17|chr2 (176799151-176799401) | |
| 260-503, gnl|Hg17|chr7 (26995883-26995642) | |
| 260-503, gnl|loxAfr1|scaffold_9144 (16182-15932) | |
| 260-503, gnl|mm7|chr2 (74527628-74527878) | |
| 260-503, gnl|Mm7|chr6 (52206957-52206715) | |
| 260-503, gnl|monDom2|scaffold_2 (76068593-76068850) | |
| 260-503, gnl|oryCun1|scaffold_200437 (126705-126945) | |
| 260-503, gnl|panTro1|chr13 (66451803-66452053) | |
| 260-503, gnl|rheMac2|chr12 (39750165-39750404) | |
| 260-503, gnl|rn3|chr3 (57194477-57194727) | |
| 260-503, gnl|tetNig1|chr2 (11105194-11104971) | |
| 260-503, gnl|xenTro1|scaffold_353 (604168-604417) | |
| 267-445, gnl|bosTau2|chr19 (31239632-31239454) | |
| 267-445, gnl|Hg17|chr17 (44055461-44055283) | |
| 267-445, gnl|Mm7|chr11 (96383698-96383876) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) |