Ss1.1-rcki24_f13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGAGACTGCCAAGGTGCTGAGGCACCATCAAGAGAAGCTAGAGGCCAGTAGCTGTGAT CATGGATACTAGTCACCTGTACTGAACAGGCCAGGACGGAAGAGGAAGTGGACTGAACAA AGACAAGATTTTAGTCAGAAGAAATCCGCAGAGCAAACAAAAACAAAAGGTGTGCCAAAG GTGAAGTTGCTGTGTGGAGCAGATCTGTTGGAGTCCTTCGGGGTCCCCAATCTGTGGAAG AGCGAGGACATCACCAAAATCGTGGGAGACTATGGGCTCATATGTATCACCCGGGCTGGA AATGACACTCAGAAGTTCATCTATGAATCCGACGTGCTGTGGAAACACCAGAACAACATC CACCTGGTGAACGAATGGATCACCAACGACATCTCATCCACGAAGATCCGGCGAGCCCTC CGCAGGGGCCAGAGCATCCGCTACTTGGTCCCGGATCTTGTCCAGGAGTACATTGAAGAG CATGGTCTCTACAGCTCCGAGAGCGAAGAGAGGAATGTTGGCATCATCCTGGCTCCTTTG CAGAGGAACACCGGGGGCACTGACGCATGAGCAGGTCTCCAGCAGGGTAGTTTGGACTTG CCTTTTGGGAATGGAAGCAATCCGGGTGTTAGCAACTGGGAGAAGGAATTGGATCCTCTA ATAAAGTAAAGCTTCAGAGTAGTTTGTTACTAAATTAAAATCAGGTTTATCTTTTCATCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGAGACTGCCAAGGTGCTGAGGCACCATCAAGAGAAGCTAGAGGCCAGTAGCTGTGAT CATGGATACTAGTCACCTGTACTGAACAGGCCAGGACGGAAGAGGAAGTGGACTGAACAA AGACAAGATTTTAGTCAGAAGAAATCCGCAGAGCAAACAAAAACAAAAGGTGTGCCAAAG GTGAAGTTGCTGTGTGGAGCAGATCTGTTGGAGTCCTTCGGGGTCCCCAATCTGTGGAAG AGCGAGGACATCACCAAAATCGTGGGAGACTATGGGCTCATATGTATCACCCGGGCTGGA AATGACACTCAGAAGTTCATCTATGAATCCGACGTGCTGTGGAAACACCAGAACAACATC CACCTGGTGAACGAATGGATCACCAACGACATCTCATCCACGAAGATCCGGCGAGCCCTC CGCAGGGGCCAGAGCATCCGCTACTTGGTCCCGGATCTTGTCCAGGAGTACATTGAAGAG CATGGTCTCTACAGCTCCGAGAGCGAAGAGAGGAATGTTGGCATCATCCTGGCTCCTTTG CAGAGGAACACCGGGGGCACTGACGCATGAGCAGGTCTCCAGCAGGGTAGTTTGGACTTG CCTTTTGGGAATGGAAGCAATCCGGGTGTTAGCAACTGGGAGAAGGAATTGGATCCTCTA ATAAAGTAAAGCTTCAGAGTAGTTTGTTACTAAATTAAAATCAGGTTTATCTTTTCATCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 82 entry(ies) | More info |
| Aligned organism(s): 82 entry(ies) | Help | Less info |
| 168-715, gnl|bosTau2|chr16 (31096943-31097495) | |
| 168-715, gnl|canFam2|chr5 (66149322-66149657) | |
| 168-715, gnl|canFam2|chr5 (66149303-66149705) | |
| 168-715, gnl|canFam2|chr5 (66149322-66149704) | |
| 168-715, gnl|canFam2|chr5 (66149322-66149715) | |
| 168-715, gnl|canFam2|chr5 (66149322-66149696) | |
| 168-715, gnl|danRer3|chr23 (41184506-41184184) | |
| 168-715, gnl|danRer3|chr23 (41184533-41184119) | |
| 168-715, gnl|danRer3|chr23 (41184530-41184145) | |
| 168-715, gnl|danRer3|chrUn (158750065-158750464) | |
| 168-715, gnl|danRer3|chrUn (158750089-158750455) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3601-3266) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3620-3218) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3601-3219) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3604-3208) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3601-3227) | |
| 168-715, gnl|echTel1|scaffold_286767 (47795-48120) | |
| 168-715, gnl|echTel1|scaffold_286767 (47767-48168) | |
| 168-715, gnl|echTel1|scaffold_286767 (47786-48167) | |
| 168-715, gnl|echTel1|scaffold_286767 (47786-48178) | |
| 168-715, gnl|echTel1|scaffold_286767 (47794-48159) | |
| 168-715, gnl|fr1|chrUn (203440718-203441042) | |
| 168-715, gnl|fr1|chrUn (203440687-203441089) | |
| 168-715, gnl|fr1|chrUn (203440724-203441089) | |
| 168-715, gnl|fr1|chrUn (203440711-203441097) | |
| 168-715, gnl|fr1|chrUn (203440715-203441081) | |
| 168-715, gnl|galGal2|chr21 (3440253-3440588) | |
| 168-715, gnl|galGal2|chr21 (3440234-3440636) | |
| 168-715, gnl|galGal2|chr21 (3440253-3440635) | |
| 168-715, gnl|galGal2|chr21 (3440250-3440646) | |
| 168-715, gnl|galGal2|chr21 (3440253-3440627) | |
| 168-715, gnl|hg17|chr1 (9976608-9977010) | |
| 168-715, gnl|Hg17|chr1 (9976623-9977146) | |
| 168-715, gnl|hg17|chr14 (80569074-80569409) | |
| 168-715, gnl|hg17|chr15 (58045189-58045571) | |
| 168-715, gnl|hg17|chr3 (191367700-191368110) | |
| 168-715, gnl|hg17|chr4 (146735203-146735577) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14665-14331) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14683-14283) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14665-14284) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14665-14273) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14665-14292) | |
| 168-715, gnl|mm7|chr4 (148458752-148458418) | |
| 168-715, gnl|mm7|chr4 (148458770-148458370) | |
| 168-715, gnl|mm7|chr4 (148458752-148458371) | |
| 168-715, gnl|mm7|chr4 (148458756-148458361) | |
| 168-715, gnl|mm7|chr4 (148458752-148458379) | |
| 168-715, gnl|monDom2|scaffold_177 (741681-741347) | |
| 168-715, gnl|monDom2|scaffold_177 (741701-741299) | |
| 168-715, gnl|monDom2|scaffold_177 (741681-741300) | |
| 168-715, gnl|monDom2|scaffold_177 (741685-741289) | |
| 168-715, gnl|monDom2|scaffold_177 (741682-741308) | |
| 168-715, gnl|oryCun1|scaffold_129759 (4092-4426) | |
| 168-715, gnl|oryCun1|scaffold_129759 (4072-4474) | |
| 168-715, gnl|oryCun1|scaffold_129759 (4092-4473) | |
| 168-715, gnl|oryCun1|scaffold_129759 (4088-4480) | |
| 168-715, gnl|oryCun1|scaffold_175770 (48037-47712) | |
| 168-715, gnl|panTro1|chr1 (10173862-10174264) | |
| 168-715, gnl|panTro1|chr15 (80676972-80677309) | |
| 168-715, gnl|panTro1|chr16 (58470519-58470901) | |
| 168-715, gnl|panTro1|chr2 (195453734-195454144) | |
| 168-715, gnl|panTro1|chr3 (163985177-163985551) | |
| 168-715, gnl|rheMac2|chr1 (13068790-13069192) | |
| 168-715, gnl|rheMac2|chr2 (182483948-182484355) | |
| 168-715, gnl|rheMac2|chr2 (182483945-182484366) | |
| 168-715, gnl|rheMac2|chr5 (137632620-137632993) | |
| 168-715, gnl|rheMac2|chr7 (144227849-144228180) | |
| 168-715, gnl|rn3|chr5 (166560651-166560317) | |
| 168-715, gnl|rn3|chr5 (166560669-166560269) | |
| 168-715, gnl|rn3|chr5 (166560651-166560270) | |
| 168-715, gnl|rn3|chr5 (166560655-166560260) | |
| 168-715, gnl|rn3|chr5 (166560651-166560278) | |
| 168-715, gnl|tetNig1|chr9 (2504355-2504028) | |
| 168-715, gnl|tetNig1|chr9 (2504355-2503983) | |
| 168-715, gnl|tetNig1|chr9 (2504346-2503983) | |
| 168-715, gnl|tetNig1|chr9 (2504355-2503984) | |
| 168-715, gnl|tetNig1|chr9 (2504355-2503989) | |
| 168-715, gnl|xenTro1|scaffold_745 (190375-190710) | |
| 168-715, gnl|xenTro1|scaffold_745 (190354-190752) | |
| 168-715, gnl|xenTro1|scaffold_745 (190375-190752) | |
| 168-715, gnl|xenTro1|scaffold_745 (190372-190768) | |
| 168-715, gnl|xenTro1|scaffold_745 (190375-190749) |
| Aligned organism(s): 82 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 168-715, gnl|bosTau2|chr16 (31096943-31097495) | |
| 168-715, gnl|canFam2|chr5 (66149322-66149657) | |
| 168-715, gnl|canFam2|chr5 (66149303-66149705) | |
| 168-715, gnl|canFam2|chr5 (66149322-66149704) | |
| 168-715, gnl|canFam2|chr5 (66149322-66149715) | |
| 168-715, gnl|canFam2|chr5 (66149322-66149696) | |
| 168-715, gnl|danRer3|chr23 (41184506-41184184) | |
| 168-715, gnl|danRer3|chr23 (41184533-41184119) | |
| 168-715, gnl|danRer3|chr23 (41184530-41184145) | |
| 168-715, gnl|danRer3|chrUn (158750065-158750464) | |
| 168-715, gnl|danRer3|chrUn (158750089-158750455) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3601-3266) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3620-3218) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3601-3219) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3604-3208) | |
| 168-715, gnl|dasNov1|scaffold_83457 (3601-3227) | |
| 168-715, gnl|echTel1|scaffold_286767 (47795-48120) | |
| 168-715, gnl|echTel1|scaffold_286767 (47767-48168) | |
| 168-715, gnl|echTel1|scaffold_286767 (47786-48167) | |
| 168-715, gnl|echTel1|scaffold_286767 (47786-48178) | |
| 168-715, gnl|echTel1|scaffold_286767 (47794-48159) | |
| 168-715, gnl|fr1|chrUn (203440718-203441042) | |
| 168-715, gnl|fr1|chrUn (203440687-203441089) | |
| 168-715, gnl|fr1|chrUn (203440724-203441089) | |
| 168-715, gnl|fr1|chrUn (203440711-203441097) | |
| 168-715, gnl|fr1|chrUn (203440715-203441081) | |
| 168-715, gnl|galGal2|chr21 (3440253-3440588) | |
| 168-715, gnl|galGal2|chr21 (3440234-3440636) | |
| 168-715, gnl|galGal2|chr21 (3440253-3440635) | |
| 168-715, gnl|galGal2|chr21 (3440250-3440646) | |
| 168-715, gnl|galGal2|chr21 (3440253-3440627) | |
| 168-715, gnl|hg17|chr1 (9976608-9977010) | |
| 168-715, gnl|Hg17|chr1 (9976623-9977146) | |
| 168-715, gnl|hg17|chr14 (80569074-80569409) | |
| 168-715, gnl|hg17|chr15 (58045189-58045571) | |
| 168-715, gnl|hg17|chr3 (191367700-191368110) | |
| 168-715, gnl|hg17|chr4 (146735203-146735577) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14665-14331) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14683-14283) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14665-14284) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14665-14273) | |
| 168-715, gnl|loxAfr1|scaffold_26847 (14665-14292) | |
| 168-715, gnl|mm7|chr4 (148458752-148458418) | |
| 168-715, gnl|mm7|chr4 (148458770-148458370) | |
| 168-715, gnl|mm7|chr4 (148458752-148458371) | |
| 168-715, gnl|mm7|chr4 (148458756-148458361) | |
| 168-715, gnl|mm7|chr4 (148458752-148458379) | |
| 168-715, gnl|monDom2|scaffold_177 (741681-741347) | |
| 168-715, gnl|monDom2|scaffold_177 (741701-741299) | |
| 168-715, gnl|monDom2|scaffold_177 (741681-741300) | |
| 168-715, gnl|monDom2|scaffold_177 (741685-741289) | |
| 168-715, gnl|monDom2|scaffold_177 (741682-741308) | |
| 168-715, gnl|oryCun1|scaffold_129759 (4092-4426) | |
| 168-715, gnl|oryCun1|scaffold_129759 (4072-4474) | |
| 168-715, gnl|oryCun1|scaffold_129759 (4092-4473) | |
| 168-715, gnl|oryCun1|scaffold_129759 (4088-4480) | |
| 168-715, gnl|oryCun1|scaffold_175770 (48037-47712) | |
| 168-715, gnl|panTro1|chr1 (10173862-10174264) | |
| 168-715, gnl|panTro1|chr15 (80676972-80677309) | |
| 168-715, gnl|panTro1|chr16 (58470519-58470901) | |
| 168-715, gnl|panTro1|chr2 (195453734-195454144) | |
| 168-715, gnl|panTro1|chr3 (163985177-163985551) | |
| 168-715, gnl|rheMac2|chr1 (13068790-13069192) | |
| 168-715, gnl|rheMac2|chr2 (182483948-182484355) | |
| 168-715, gnl|rheMac2|chr2 (182483945-182484366) | |
| 168-715, gnl|rheMac2|chr5 (137632620-137632993) | |
| 168-715, gnl|rheMac2|chr7 (144227849-144228180) | |
| 168-715, gnl|rn3|chr5 (166560651-166560317) | |
| 168-715, gnl|rn3|chr5 (166560669-166560269) | |
| 168-715, gnl|rn3|chr5 (166560651-166560270) | |
| 168-715, gnl|rn3|chr5 (166560655-166560260) | |
| 168-715, gnl|rn3|chr5 (166560651-166560278) | |
| 168-715, gnl|tetNig1|chr9 (2504355-2504028) | |
| 168-715, gnl|tetNig1|chr9 (2504355-2503983) | |
| 168-715, gnl|tetNig1|chr9 (2504346-2503983) | |
| 168-715, gnl|tetNig1|chr9 (2504355-2503984) | |
| 168-715, gnl|tetNig1|chr9 (2504355-2503989) | |
| 168-715, gnl|xenTro1|scaffold_745 (190375-190710) | |
| 168-715, gnl|xenTro1|scaffold_745 (190354-190752) | |
| 168-715, gnl|xenTro1|scaffold_745 (190375-190752) | |
| 168-715, gnl|xenTro1|scaffold_745 (190372-190768) | |
| 168-715, gnl|xenTro1|scaffold_745 (190375-190749) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| nje (0.33184) | |
| fbs (0.175346) | |
| cki (0.165235) | |
| ski (0.146735) | |
| kid (0.129735) | |
| bla (0.124347) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.33184) | |
| fbs (0.175346) | |
| cki (0.165235) | |
| ski (0.146735) | |
| kid (0.129735) | |
| bla (0.124347) |