Ss1.1-rcki27_i7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCATTTTTTCTCAAATCATGAAGCCGGAAAGCATAATCTGCACTAATTTAAATATTATGA TCCATGTCCAATCCAATATGCTGAAAGCCCTCATAGAAATCCTGAAGGATGCCACAGAGG GAAATTTATCAAGATTTGTGAAAAAACATGTGTTCTCAGAAGAAGTGCTGGTCAAAGTGA GGGAAAAGGTGAAGCACGTGCCTGCTCTTCTGGCCAAATTTGACGAGCTCTATGGGAAAC TGCACGTAAATGGCCAGGTCACAACTTACAGTTTGGATGCTCTGCTCTGCCACACGCCCA GGGACGTGAAATCCCACATGGGGCTGCTCAACAAGAGGACAGTCAGCCGTCGGACCTTCC AGCCACTCAGCCAGTCCCTGTGGGCCGAATAACCCTGGGTTCAAACCAGCCGTGGGCCTG AGTTGGAGGGGCCTGCCTCTAGTGAGTTACTGGCTTCCTAAGAAGTCAGGCATCCCACTC CGGTGCATCCTCTCCTAACCCCTGGTCTCCTCCTTCAATCTCCACATTCACTGACTGCTG GCAGGCTGACTTGAGAAGTTCAAGGTGTGCCGTTGTGAAGCAAGCACAGCAGAAAGCTTG GCCCCCCGCGGAAAGGAGGCTTCCCTGCACAGACTGCCGCGGATCCTCGGAGGGACACGG TCACGGTCACCGTGTTCAGCCCAGCTTCTGTACCAGAGCAGAACCCAGGAAGCACTCGCT GGCAGGAAGGAATTTCACCGGAAGTCGCCAGCTCCAGCCAACATCCAGGGGAATAGTTAC TTCCAGATTATTCCCTTGCTGAATTCAGGAGGTCGGGAAAACCTATTCTGTGCTGGGGAG TAGCCCAGGATTTTCTCACTGCTTCTGTCCTCACTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCATTTTTTCTCAAATCATGAAGCCGGAAAGCATAATCTGCACTAATTTAAATATTATGA TCCATGTCCAATCCAATATGCTGAAAGCCCTCATAGAAATCCTGAAGGATGCCACAGAGG GAAATTTATCAAGATTTGTGAAAAAACATGTGTTCTCAGAAGAAGTGCTGGTCAAAGTGA GGGAAAAGGTGAAGCACGTGCCTGCTCTTCTGGCCAAATTTGACGAGCTCTATGGGAAAC TGCACGTAAATGGCCAGGTCACAACTTACAGTTTGGATGCTCTGCTCTGCCACACGCCCA GGGACGTGAAATCCCACATGGGGCTGCTCAACAAGAGGACAGTCAGCCGTCGGACCTTCC AGCCACTCAGCCAGTCCCTGTGGGCCGAATAACCCTGGGTTCAAACCAGCCGTGGGCCTG AGTTGGAGGGGCCTGCCTCTAGTGAGTTACTGGCTTCCTAAGAAGTCAGGCATCCCACTC CGGTGCATCCTCTCCTAACCCCTGGTCTCCTCCTTCAATCTCCACATTCACTGACTGCTG GCAGGCTGACTTGAGAAGTTCAAGGTGTGCCGTTGTGAAGCAAGCACAGCAGAAAGCTTG GCCCCCCGCGGAAAGGAGGCTTCCCTGCACAGACTGCCGCGGATCCTCGGAGGGACACGG TCACGGTCACCGTGTTCAGCCCAGCTTCTGTACCAGAGCAGAACCCAGGAAGCACTCGCT GGCAGGAAGGAATTTCACCGGAAGTCGCCAGCTCCAGCCAACATCCAGGGGAATAGTTAC TTCCAGATTATTCCCTTGCTGAATTCAGGAGGTCGGGAAAACCTATTCTGTGCTGGGGAG TAGCCCAGGATTTTCTCACTGCTTCTGTCCTCACTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 167-869, gnl|bosTau2|chr20 (6561852-6562558) | |
| 167-869, gnl|canFam2|chr2 (58254454-58254987) | |
| 167-869, gnl|canFam2|chr2 (58254436-58254986) | |
| 167-869, gnl|dasNov1|scaffold_203011 (3605-3121) | |
| 167-869, gnl|dasNov1|scaffold_203011 (3628-3121) | |
| 167-869, gnl|echTel1|scaffold_159759 (2556-3062) | |
| 167-869, gnl|echTel1|scaffold_159759 (2536-3061) | |
| 167-869, gnl|hg17|chr10 (90627048-90627574) | |
| 167-869, gnl|hg17|chr5 (71689768-71690296) | |
| 167-869, gnl|Hg17|chr5 (71689785-71690465) | |
| 167-869, gnl|mm7|chr13 (96390191-96389713) | |
| 167-869, gnl|mm7|chr13 (96390205-96389714) | |
| 167-869, gnl|Mm7|chr13 (96390191-96389565) | |
| 167-869, gnl|monDom2|scaffold_60 (5352779-5353307) | |
| 167-869, gnl|panTro1|chr4 (43773025-43772497) | |
| 167-869, gnl|panTro1|chr8 (92316926-92317452) | |
| 167-869, gnl|rheMac2|chr6 (68504635-68505166) | |
| 167-869, gnl|rheMac2|chr9 (88453662-88454188) | |
| 167-869, gnl|rn3|chr2 (30231481-30231021) | |
| 167-869, gnl|rn3|chr2 (30231496-30231022) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 167-869, gnl|bosTau2|chr20 (6561852-6562558) | |
| 167-869, gnl|canFam2|chr2 (58254454-58254987) | |
| 167-869, gnl|canFam2|chr2 (58254436-58254986) | |
| 167-869, gnl|dasNov1|scaffold_203011 (3605-3121) | |
| 167-869, gnl|dasNov1|scaffold_203011 (3628-3121) | |
| 167-869, gnl|echTel1|scaffold_159759 (2556-3062) | |
| 167-869, gnl|echTel1|scaffold_159759 (2536-3061) | |
| 167-869, gnl|hg17|chr10 (90627048-90627574) | |
| 167-869, gnl|hg17|chr5 (71689768-71690296) | |
| 167-869, gnl|Hg17|chr5 (71689785-71690465) | |
| 167-869, gnl|mm7|chr13 (96390191-96389713) | |
| 167-869, gnl|mm7|chr13 (96390205-96389714) | |
| 167-869, gnl|Mm7|chr13 (96390191-96389565) | |
| 167-869, gnl|monDom2|scaffold_60 (5352779-5353307) | |
| 167-869, gnl|panTro1|chr4 (43773025-43772497) | |
| 167-869, gnl|panTro1|chr8 (92316926-92317452) | |
| 167-869, gnl|rheMac2|chr6 (68504635-68505166) | |
| 167-869, gnl|rheMac2|chr9 (88453662-88454188) | |
| 167-869, gnl|rn3|chr2 (30231481-30231021) | |
| 167-869, gnl|rn3|chr2 (30231496-30231022) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) | |
| cki (0.165235) |