Non-Coding RNA Search

Ss1.1-rcki31_l16.5

Sequence:


               
               TGTATCACGGAGATGTCAGTAATGATGGCTTGCTGGAAGCAGAATGAATTCCGCGACGAA
GCGTGCAGAAAAGAGATTCAGGACTTCTTCGATTGTGCTTCGAGGGCTGAGGTGACAGGA
GGCTCCTGGGGTGCCCTCTTGGGAGGAGAATGGGGTATACAGTATGGTTCTTACTGCCTC
TTGCTTGGTGATAAGAAAATTCTTCTCCCTCAAAAAGGGCGAGAAAAGTTTTTGGGATCT
ACTTGACTCATGCCAAAGTGCGAAAGTTTACAATTTTGAAGGCATCGTGATCTTGAGCGA
TTTGTTTTACTGCTTTTAGCTTTATCAGATGTACAGTGAGGTTAATATTCATATCTGCCT
TAAAGAATTTTGTGAGTGTTAAGTGAAGAAATGAATGGGAAAACCACATTGTAAAATTTA
AATTGCTGCTCAAATAGACATTATTCTCCCAAGTGAACTAAAGATAGGAAAGGACAGTTT
ATTTGGTTTCCAGCTTAGATTTAATTGCCAGCTGGATGATGGCTTCAGATCATACAGTCA
TTCATGGTTCCCAAGTCCTTTTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTATCACGGAGATGTCAGTAATGATGGCTTGCTGGAAGCAGAATGAATTCCGCGACGAA
GCGTGCAGAAAAGAGATTCAGGACTTCTTCGATTGTGCTTCGAGGGCTGAGGTGACAGGA
GGCTCCTGGGGTGCCCTCTTGGGAGGAGAATGGGGTATACAGTATGGTTCTTACTGCCTC
TTGCTTGGTGATAAGAAAATTCTTCTCCCTCAAAAAGGGCGAGAAAAGTTTTTGGGATCT
ACTTGACTCATGCCAAAGTGCGAAAGTTTACAATTTTGAAGGCATCGTGATCTTGAGCGA
TTTGTTTTACTGCTTTTAGCTTTATCAGATGTACAGTGAGGTTAATATTCATATCTGCCT
TAAAGAATTTTGTGAGTGTTAAGTGAAGAAATGAATGGGAAAACCACATTGTAAAATTTA
AATTGCTGCTCAAATAGACATTATTCTCCCAAGTGAACTAAAGATAGGAAAGGACAGTTT
ATTTGGTTTCCAGCTTAGATTTAATTGCCAGCTGGATGATGGCTTCAGATCATACAGTCA
TTCATGGTTCCCAAGTCCTTTTGA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-559, gnl|bosTau2|chr28 (22923631-22924194)
               

               
               1-559, gnl|Hg17|chr10 (75212095-75212645)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-559, gnl|bosTau2|chr28 (22923631-22924194)
               

               
               1-559, gnl|Hg17|chr10 (75212095-75212645)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               spl (0.286369)
               

               
               cki (0.165235)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               spl (0.286369)
               

               
               cki (0.165235)

	1-559, gnl\|bosTau2\|chr28 (22923631-22924194)
	1-559, gnl\|Hg17\|chr10 (75212095-75212645)