Ss1.1-rcki32_g7.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGATGCTTCCTTTTTCCATTTGGTTTATTTAAAAATCATCTATTCTGATTGACCTGTAAG AATGAATGATATAAAGGGCTATACAAATAATTTTCTTTCAAAGTCATAAAACTATTCATA CTTTTTTTCTTTCTTTTTTTCTTTTTTTTTTTTTTTTGGAAACAGGAGTTAATGCCAAGA GCGCCTCGCAAGTCATCTACTGTTTAAAAAGAAACGGAGCTGCCCCGAACGGGTCTAAAT CGCCCGGCTGTGGCTGCTGGGGCTGCTGGGATCCCAGGCCCTGCACCACCAGCTCTGTAA AGGGCACGGCCCCAAAATCATCCATTTTCAAGGCCTCTGCGCCGTGGAAGGCCCCGTGCA GTGAACCGGGCCTCGGCCGCCCGGGCAGAACGGGGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGATGCTTCCTTTTTCCATTTGGTTTATTTAAAAATCATCTATTCTGATTGACCTGTAAG AATGAATGATATAAAGGGCTATACAAATAATTTTCTTTCAAAGTCATAAAACTATTCATA CTTTTTTTCTTTCTTTTTTTCTTTTTTTTTTTTTTTTGGAAACAGGAGTTAATGCCAAGA GCGCCTCGCAAGTCATCTACTGTTTAAAAAGAAACGGAGCTGCCCCGAACGGGTCTAAAT CGCCCGGCTGTGGCTGCTGGGGCTGCTGGGATCCCAGGCCCTGCACCACCAGCTCTGTAA AGGGCACGGCCCCAAAATCATCCATTTTCAAGGCCTCTGCGCCGTGGAAGGCCCCGTGCA GTGAACCGGGCCTCGGCCGCCCGGGCAGAACGGGGT |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-136, gnl|bosTau2|chr19 (35912416-35912551) | |
| 1-136, gnl|Hg17|chr4 (80190526-80190404) | |
| 1-136, gnl|Mm7|chr5 (96301643-96301522) | |
| 145-396, gnl|bosTau2|chr19 (35912538-35912789) | |
| 145-396, gnl|canFam2|chr32 (6252538-6252751) | |
| 145-396, gnl|canFam2|chr32 (6252077-6252751) | |
| 145-396, gnl|danRer3|chr5 (36519092-36518891) | |
| 145-396, gnl|danRer3|chr5 (36195740-36196369) | |
| 145-396, gnl|dasNov1|scaffold_2549 (114531-114744) | |
| 145-396, gnl|dasNov1|scaffold_2549 (114070-114744) | |
| 145-396, gnl|echTel1|scaffold_308307 (9436-9229) | |
| 145-396, gnl|echTel1|scaffold_308307 (9965-9229) | |
| 145-396, gnl|fr1|chrUn (72814667-72814461) | |
| 145-396, gnl|fr1|chrUn (72815122-72814461) | |
| 145-396, gnl|galGal2|chr4 (45516045-45516252) | |
| 145-396, gnl|galGal2|chr4 (45515585-45516252) | |
| 145-396, gnl|hg17|chr4 (80189700-80190374) | |
| 145-396, gnl|Hg17|chr4 (80190409-80190167) | |
| 145-396, gnl|hg17|chrX (73189806-73190019) | |
| 145-396, gnl|loxAfr1|scaffold_21581 (35037-34824) | |
| 145-396, gnl|loxAfr1|scaffold_21581 (35501-34824) | |
| 145-396, gnl|mm7|chr5 (96301290-96301494) | |
| 145-396, gnl|mm7|chr5 (96300829-96301494) | |
| 145-396, gnl|Mm7|chr5 (96301527-96301296) | |
| 145-396, gnl|monDom2|scaffold_37 (22774919-22774706) | |
| 145-396, gnl|monDom2|scaffold_37 (22775383-22774706) | |
| 145-396, gnl|oryCun1|scaffold_207728 (45966-46180) | |
| 145-396, gnl|oryCun1|scaffold_207728 (45505-46180) | |
| 145-396, gnl|panTro1|chr3 (53537487-53536813) | |
| 145-396, gnl|panTro1|chrX (75670383-75670596) | |
| 145-396, gnl|rheMac2|chr5 (50688556-50687882) | |
| 145-396, gnl|rheMac2|chrX (73280182-73280395) | |
| 145-396, gnl|rn3|chr14 (13937902-13937698) | |
| 145-396, gnl|rn3|chr14 (13938366-13937698) | |
| 145-396, gnl|tetNig1|chrUn_random (130502842-130502650) | |
| 145-396, gnl|tetNig1|chrUn_random (130503300-130502650) | |
| 145-396, gnl|xenTro1|scaffold_294 (350117-349899) | |
| 145-396, gnl|xenTro1|scaffold_294 (350579-349899) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-136, gnl|bosTau2|chr19 (35912416-35912551) | |
| 1-136, gnl|Hg17|chr4 (80190526-80190404) | |
| 1-136, gnl|Mm7|chr5 (96301643-96301522) | |
| 145-396, gnl|bosTau2|chr19 (35912538-35912789) | |
| 145-396, gnl|canFam2|chr32 (6252538-6252751) | |
| 145-396, gnl|canFam2|chr32 (6252077-6252751) | |
| 145-396, gnl|danRer3|chr5 (36519092-36518891) | |
| 145-396, gnl|danRer3|chr5 (36195740-36196369) | |
| 145-396, gnl|dasNov1|scaffold_2549 (114531-114744) | |
| 145-396, gnl|dasNov1|scaffold_2549 (114070-114744) | |
| 145-396, gnl|echTel1|scaffold_308307 (9436-9229) | |
| 145-396, gnl|echTel1|scaffold_308307 (9965-9229) | |
| 145-396, gnl|fr1|chrUn (72814667-72814461) | |
| 145-396, gnl|fr1|chrUn (72815122-72814461) | |
| 145-396, gnl|galGal2|chr4 (45516045-45516252) | |
| 145-396, gnl|galGal2|chr4 (45515585-45516252) | |
| 145-396, gnl|hg17|chr4 (80189700-80190374) | |
| 145-396, gnl|Hg17|chr4 (80190409-80190167) | |
| 145-396, gnl|hg17|chrX (73189806-73190019) | |
| 145-396, gnl|loxAfr1|scaffold_21581 (35037-34824) | |
| 145-396, gnl|loxAfr1|scaffold_21581 (35501-34824) | |
| 145-396, gnl|mm7|chr5 (96301290-96301494) | |
| 145-396, gnl|mm7|chr5 (96300829-96301494) | |
| 145-396, gnl|Mm7|chr5 (96301527-96301296) | |
| 145-396, gnl|monDom2|scaffold_37 (22774919-22774706) | |
| 145-396, gnl|monDom2|scaffold_37 (22775383-22774706) | |
| 145-396, gnl|oryCun1|scaffold_207728 (45966-46180) | |
| 145-396, gnl|oryCun1|scaffold_207728 (45505-46180) | |
| 145-396, gnl|panTro1|chr3 (53537487-53536813) | |
| 145-396, gnl|panTro1|chrX (75670383-75670596) | |
| 145-396, gnl|rheMac2|chr5 (50688556-50687882) | |
| 145-396, gnl|rheMac2|chrX (73280182-73280395) | |
| 145-396, gnl|rn3|chr14 (13937902-13937698) | |
| 145-396, gnl|rn3|chr14 (13938366-13937698) | |
| 145-396, gnl|tetNig1|chrUn_random (130502842-130502650) | |
| 145-396, gnl|tetNig1|chrUn_random (130503300-130502650) | |
| 145-396, gnl|xenTro1|scaffold_294 (350117-349899) | |
| 145-396, gnl|xenTro1|scaffold_294 (350579-349899) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nlu (0.191681) | |
| cki (0.165235) |