Ss1.1-rcki34_f21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTAATGCTACCTATACCCTCCTGGACATGCCTTGTGGCGGAACATATAATGCAACTTGG ACCTCACAAAGTATTTGGTCCCCCAGTTCCTCAGACCCAGATGTCCCACTGACCACCTGC ACTTGGGTCATCGAAGCGCCTCTGCATCAGCAAGTCGAGATAACCGTGTGGACATTTCAG CTGCACTCACAGGACTGCGACCAGAATTACTTAGAGTTTCGGGACCCCCCAGAGAGAAAT GGAAATCCAGGAATTCGGTTCTGTGGCAGAAATGCTTCAGCTGTACCCACGTTTTATTCT TCCCTGAGCACCGCGATCATCATTTTCAAGTCTGAAGTTTTCAACACAGACTCTAGAGTG GGTTTTACCTACCGGATTGCAGGCTGCAGCCGCGAGTACCAGAAGGCGTTCGGCCGCCTC CGGAGCCCCGGCTGGCCGGCCGGCTACGCCAGCAACGTGGACTGCGCCGTCGTCCTCAGG GCCCCCCGAAACCACACCATCTCCCTTTTCTTCCACGCCTTCGGCCTCGAGGACTCCGGC GGATGCACGCGGGACTTCTTGGAGGTAAGAAATGGAAGCGAGAGCACTTCGCCACTGCTT GGCAAGTACTGTGGGACTCTGCTGCCAAATCCCATTTTCTCTCAGAGTCGTGACCTGTAC CTGCGGTTTAAGAGCGATAGTGCAACTTCGGGTCGTGGCTATGAAATCATCTGGACCTCA TCACCCTCTGGCTGTGGCGGGACTCTTTATGGAGACAGCGGCTTGGTCACCAGCCCTGGC TATCCCGGCACTTACCCCAACCACACTCACTGCGAATGGGTCATCATTGCTCCTGGTGGA AGACCTGTCACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTAATGCTACCTATACCCTCCTGGACATGCCTTGTGGCGGAACATATAATGCAACTTGG ACCTCACAAAGTATTTGGTCCCCCAGTTCCTCAGACCCAGATGTCCCACTGACCACCTGC ACTTGGGTCATCGAAGCGCCTCTGCATCAGCAAGTCGAGATAACCGTGTGGACATTTCAG CTGCACTCACAGGACTGCGACCAGAATTACTTAGAGTTTCGGGACCCCCCAGAGAGAAAT GGAAATCCAGGAATTCGGTTCTGTGGCAGAAATGCTTCAGCTGTACCCACGTTTTATTCT TCCCTGAGCACCGCGATCATCATTTTCAAGTCTGAAGTTTTCAACACAGACTCTAGAGTG GGTTTTACCTACCGGATTGCAGGCTGCAGCCGCGAGTACCAGAAGGCGTTCGGCCGCCTC CGGAGCCCCGGCTGGCCGGCCGGCTACGCCAGCAACGTGGACTGCGCCGTCGTCCTCAGG GCCCCCCGAAACCACACCATCTCCCTTTTCTTCCACGCCTTCGGCCTCGAGGACTCCGGC GGATGCACGCGGGACTTCTTGGAGGTAAGAAATGGAAGCGAGAGCACTTCGCCACTGCTT GGCAAGTACTGTGGGACTCTGCTGCCAAATCCCATTTTCTCTCAGAGTCGTGACCTGTAC CTGCGGTTTAAGAGCGATAGTGCAACTTCGGGTCGTGGCTATGAAATCATCTGGACCTCA TCACCCTCTGGCTGTGGCGGGACTCTTTATGGAGACAGCGGCTTGGTCACCAGCCCTGGC TATCCCGGCACTTACCCCAACCACACTCACTGCGAATGGGTCATCATTGCTCCTGGTGGA AGACCTGTCACT |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 29-234, gnl|bosTau2|chr4 (2701336-2701131) | |
| 29-234, gnl|canFam2|chr2 (22864871-22864647) | |
| 29-234, gnl|canFam2|chr2 (22864931-22864655) | |
| 29-234, gnl|galGal2|chr2 (19293082-19292867) | |
| 29-234, gnl|galGal2|chr2 (19293140-19292867) | |
| 29-234, gnl|hg17|chr10 (16922332-16922561) | |
| 29-234, gnl|hg17|chr10 (45062048-45062315) | |
| 29-234, gnl|Hg17|chr10 (16922540-16922335) | |
| 29-234, gnl|loxAfr1|scaffold_10247 (38599-38816) | |
| 29-234, gnl|loxAfr1|scaffold_10247 (38549-38802) | |
| 29-234, gnl|mm7|chr2 (13226136-13226366) | |
| 29-234, gnl|mm7|chr2 (13226102-13226352) | |
| 29-234, gnl|Mm7|chr2 (13226344-13226139) | |
| 29-234, gnl|monDom2|scaffold_7 (52733100-52732870) | |
| 29-234, gnl|monDom2|scaffold_7 (52733147-52732879) | |
| 29-234, gnl|oryCun1|scaffold_205500 (36217-35994) | |
| 29-234, gnl|oryCun1|scaffold_205500 (36277-36001) | |
| 29-234, gnl|panTro1|chr8 (17438032-17438261) | |
| 29-234, gnl|panTro1|chr8 (17428877-17429151) | |
| 29-234, gnl|rheMac2|chr9 (17125174-17125403) | |
| 29-234, gnl|rheMac2|chr9 (45496893-45497154) | |
| 29-234, gnl|rn3|chr17 (87565662-87565893) | |
| 29-234, gnl|rn3|chr17 (87565628-87565878) | |
| 29-234, gnl|xenTro1|scaffold_553 (593077-593309) | |
| 29-234, gnl|xenTro1|scaffold_553 (593051-593296) | |
| 556-731, gnl|bosTau2|chr4 (2694017-2693842) | |
| 556-731, gnl|canFam2|chr2 (22871863-22871679) | |
| 556-731, gnl|canFam2|chr2 (22871863-22871679) | |
| 556-731, gnl|danRer3|chrNA (13221633-13221451) | |
| 556-731, gnl|echTel1|scaffold_311971 (2434-2618) | |
| 556-731, gnl|echTel1|scaffold_311971 (2434-2618) | |
| 556-731, gnl|fr1|chrUn (297178134-297178315) | |
| 556-731, gnl|fr1|chrUn (297178132-297178315) | |
| 556-731, gnl|galGal2|chr2 (19295522-19295343) | |
| 556-731, gnl|galGal2|chr2 (19295522-19295343) | |
| 556-731, gnl|hg17|chr10 (16913250-16913434) | |
| 556-731, gnl|hg17|chr10 (45053665-45053841) | |
| 556-731, gnl|Hg17|chr10 (16913431-16913256) | |
| 556-731, gnl|loxAfr1|scaffold_10247 (28940-29124) | |
| 556-731, gnl|loxAfr1|scaffold_10247 (28940-29124) | |
| 556-731, gnl|mm7|chr2 (13219227-13219411) | |
| 556-731, gnl|mm7|chr2 (13219227-13219411) | |
| 556-731, gnl|Mm7|chr2 (13219408-13219233) | |
| 556-731, gnl|monDom2|scaffold_7 (52738444-52738260) | |
| 556-731, gnl|monDom2|scaffold_7 (52738444-52738262) | |
| 556-731, gnl|oryCun1|scaffold_205500 (45805-45620) | |
| 556-731, gnl|oryCun1|scaffold_205500 (45805-45620) | |
| 556-731, gnl|panTro1|chr8 (17419901-17420085) | |
| 556-731, gnl|panTro1|chr8 (45849339-45849515) | |
| 556-731, gnl|rheMac2|chr9 (17116990-17117174) | |
| 556-731, gnl|rheMac2|chr9 (45488403-45488587) | |
| 556-731, gnl|tetNig1|chrUn_random (52038668-52038846) | |
| 556-731, gnl|xenTro1|scaffold_553 (589432-589610) | |
| 556-731, gnl|xenTro1|scaffold_553 (589432-589610) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 29-234, gnl|bosTau2|chr4 (2701336-2701131) | |
| 29-234, gnl|canFam2|chr2 (22864871-22864647) | |
| 29-234, gnl|canFam2|chr2 (22864931-22864655) | |
| 29-234, gnl|galGal2|chr2 (19293082-19292867) | |
| 29-234, gnl|galGal2|chr2 (19293140-19292867) | |
| 29-234, gnl|hg17|chr10 (16922332-16922561) | |
| 29-234, gnl|hg17|chr10 (45062048-45062315) | |
| 29-234, gnl|Hg17|chr10 (16922540-16922335) | |
| 29-234, gnl|loxAfr1|scaffold_10247 (38599-38816) | |
| 29-234, gnl|loxAfr1|scaffold_10247 (38549-38802) | |
| 29-234, gnl|mm7|chr2 (13226136-13226366) | |
| 29-234, gnl|mm7|chr2 (13226102-13226352) | |
| 29-234, gnl|Mm7|chr2 (13226344-13226139) | |
| 29-234, gnl|monDom2|scaffold_7 (52733100-52732870) | |
| 29-234, gnl|monDom2|scaffold_7 (52733147-52732879) | |
| 29-234, gnl|oryCun1|scaffold_205500 (36217-35994) | |
| 29-234, gnl|oryCun1|scaffold_205500 (36277-36001) | |
| 29-234, gnl|panTro1|chr8 (17438032-17438261) | |
| 29-234, gnl|panTro1|chr8 (17428877-17429151) | |
| 29-234, gnl|rheMac2|chr9 (17125174-17125403) | |
| 29-234, gnl|rheMac2|chr9 (45496893-45497154) | |
| 29-234, gnl|rn3|chr17 (87565662-87565893) | |
| 29-234, gnl|rn3|chr17 (87565628-87565878) | |
| 29-234, gnl|xenTro1|scaffold_553 (593077-593309) | |
| 29-234, gnl|xenTro1|scaffold_553 (593051-593296) | |
| 556-731, gnl|bosTau2|chr4 (2694017-2693842) | |
| 556-731, gnl|canFam2|chr2 (22871863-22871679) | |
| 556-731, gnl|canFam2|chr2 (22871863-22871679) | |
| 556-731, gnl|danRer3|chrNA (13221633-13221451) | |
| 556-731, gnl|echTel1|scaffold_311971 (2434-2618) | |
| 556-731, gnl|echTel1|scaffold_311971 (2434-2618) | |
| 556-731, gnl|fr1|chrUn (297178134-297178315) | |
| 556-731, gnl|fr1|chrUn (297178132-297178315) | |
| 556-731, gnl|galGal2|chr2 (19295522-19295343) | |
| 556-731, gnl|galGal2|chr2 (19295522-19295343) | |
| 556-731, gnl|hg17|chr10 (16913250-16913434) | |
| 556-731, gnl|hg17|chr10 (45053665-45053841) | |
| 556-731, gnl|Hg17|chr10 (16913431-16913256) | |
| 556-731, gnl|loxAfr1|scaffold_10247 (28940-29124) | |
| 556-731, gnl|loxAfr1|scaffold_10247 (28940-29124) | |
| 556-731, gnl|mm7|chr2 (13219227-13219411) | |
| 556-731, gnl|mm7|chr2 (13219227-13219411) | |
| 556-731, gnl|Mm7|chr2 (13219408-13219233) | |
| 556-731, gnl|monDom2|scaffold_7 (52738444-52738260) | |
| 556-731, gnl|monDom2|scaffold_7 (52738444-52738262) | |
| 556-731, gnl|oryCun1|scaffold_205500 (45805-45620) | |
| 556-731, gnl|oryCun1|scaffold_205500 (45805-45620) | |
| 556-731, gnl|panTro1|chr8 (17419901-17420085) | |
| 556-731, gnl|panTro1|chr8 (45849339-45849515) | |
| 556-731, gnl|rheMac2|chr9 (17116990-17117174) | |
| 556-731, gnl|rheMac2|chr9 (45488403-45488587) | |
| 556-731, gnl|tetNig1|chrUn_random (52038668-52038846) | |
| 556-731, gnl|xenTro1|scaffold_553 (589432-589610) | |
| 556-731, gnl|xenTro1|scaffold_553 (589432-589610) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.660939) | |
| ill (0.175593) | |
| nco (0.161734) |