Non-Coding RNA Search

Ss1.1-rcli08b_a16.5

Sequence:


               
               CTCAGAGGGAGGACCAGCAGGGAGCCCACCTCCGCTCAGCCCTGCCCTGGAGCTAAACTG
CCCCCTCGAGAAGATGAAGGTCTCCGTGGCTTCCCTCTTTCTCCTCATCCTCATCCTCGC
CACTACTTCTGCTCTTCGCGGCCAGGAAAGAATTCCTGACTGGGTGAACCCTCCACCCAC
CTGCTGCCTGACGTATCATGAGAAGGTTTTGCCAAGGAAACTGGTGGTGGGCTACAAAAA
GGCCTTCAACTGCCACCTACCAGCAATCATCTTCATCACCAAACGGAACCGAGAGATCTG
CACCAACCCTGATGACAAGTGGGTCCAAAAGTACATCAAGGATCCCAAACTATCTTTGCA
GCCTTCCAGGGTGTCGGCCTAGTTGACATTCTCAGATCAGAGAAAGGCCCACCCCAGCTC
TTCAACTCCCCAAGGGGGTCAGGCCTCAGTGGGAGCCCAAGTCTGGGGAAAAGAAGGTGT
AACCCTGTGGAGATACAGGAAGCCTTGTGGTCTGATTGACAGAGTCACATTCAGAGAAGC
AGACCAGTGATCTAAAAAGTAATTAAAAGTGGTATCAAATATAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAGAGGGAGGACCAGCAGGGAGCCCACCTCCGCTCAGCCCTGCCCTGGAGCTAAACTG
CCCCCTCGAGAAGATGAAGGTCTCCGTGGCTTCCCTCTTTCTCCTCATCCTCATCCTCGC
CACTACTTCTGCTCTTCGCGGCCAGGAAAGAATTCCTGACTGGGTGAACCCTCCACCCAC
CTGCTGCCTGACGTATCATGAGAAGGTTTTGCCAAGGAAACTGGTGGTGGGCTACAAAAA
GGCCTTCAACTGCCACCTACCAGCAATCATCTTCATCACCAAACGGAACCGAGAGATCTG
CACCAACCCTGATGACAAGTGGGTCCAAAAGTACATCAAGGATCCCAAACTATCTTTGCA
GCCTTCCAGGGTGTCGGCCTAGTTGACATTCTCAGATCAGAGAAAGGCCCACCCCAGCTC
TTCAACTCCCCAAGGGGGTCAGGCCTCAGTGGGAGCCCAAGTCTGGGGAAAAGAAGGTGT
AACCCTGTGGAGATACAGGAAGCCTTGTGGTCTGATTGACAGAGTCACATTCAGAGAAGC
AGACCAGTGATCTAAAAAGTAATTAAAAGTGGTATCAAATATAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               CCL16_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               CCL16_HUMAN

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               268-562, gnl|bosTau2|chr19 (7849041-7849341)
               

               
               268-562, gnl|Hg17|chr17 (31328883-31328584)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               268-562, gnl|bosTau2|chr19 (7849041-7849341)
               

               
               268-562, gnl|Hg17|chr17 (31328883-31328584)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cli (3.20905)
               

               
               fli (1.62305)
               

               
               eli (0.910885)
               

               
               elu (0.385356)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (3.20905)
               

               
               fli (1.62305)
               

               
               eli (0.910885)
               

               
               elu (0.385356)

	268-562, gnl\|bosTau2\|chr19 (7849041-7849341)
	268-562, gnl\|Hg17\|chr17 (31328883-31328584)