Ss1.1-rcli09b_m3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATACCACCAATGCCTGCTATGGTGGCACAGCCTCCCTCTTCAACGCTGCCAACTGGGTG GAGTCCAGCGCCTGGGATGGTCGCTATGCGGTAGTGGTCTGTGGAGACATCGCTGTCTAC CCCAGGGGAAACTCCCGCCCCACAGGCGGGGCTGGAGCCGTGGCCATGCTGGTTGGGCCT GAGGCCCCTCTGGCCTTGGAGAGAGGGCTTAGAGGAACCCACATGGAGAATGCGTATGAC TTCTACAAGCCAAATGCCACTTCTGAGTACCCACTGGTGGATGGGAAGCTCTCCATCCAG TGCTACCTTCGGGCCCTGGACCGATGCTACACATTATACCGTCAAAAGATCGAGAAGCAG TGGAAGCAAGCTGGCATCGAGCGACATTTCACCCTCGACGATTTACAGTTTATGATCTTC CACACACCCTTCTGCAAGTTGGTCCAGAAATCCTTGGCTCGCCTGATGTTCAGTGACTTC CTGTTGGCCGACAGCGACACCCAGTCCAGCCTCTACAAGGGGCTGGAGGCCTTCAGGGGA CAAAAGCTGGAAGACACCTACGCAAATAAAGACATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATACCACCAATGCCTGCTATGGTGGCACAGCCTCCCTCTTCAACGCTGCCAACTGGGTG GAGTCCAGCGCCTGGGATGGTCGCTATGCGGTAGTGGTCTGTGGAGACATCGCTGTCTAC CCCAGGGGAAACTCCCGCCCCACAGGCGGGGCTGGAGCCGTGGCCATGCTGGTTGGGCCT GAGGCCCCTCTGGCCTTGGAGAGAGGGCTTAGAGGAACCCACATGGAGAATGCGTATGAC TTCTACAAGCCAAATGCCACTTCTGAGTACCCACTGGTGGATGGGAAGCTCTCCATCCAG TGCTACCTTCGGGCCCTGGACCGATGCTACACATTATACCGTCAAAAGATCGAGAAGCAG TGGAAGCAAGCTGGCATCGAGCGACATTTCACCCTCGACGATTTACAGTTTATGATCTTC CACACACCCTTCTGCAAGTTGGTCCAGAAATCCTTGGCTCGCCTGATGTTCAGTGACTTC CTGTTGGCCGACAGCGACACCCAGTCCAGCCTCTACAAGGGGCTGGAGGCCTTCAGGGGA CAAAAGCTGGAAGACACCTACGCAAATAAAGACATA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 204-374, gnl|bosTau2|chr20 (18802395-18802565) | |
| 204-374, gnl|canFam2|chr4 (69845487-69845651) | |
| 204-374, gnl|canFam2|chr4 (69845660-69845469) | |
| 204-374, gnl|danRer3|chr24 (28608885-28609048) | |
| 204-374, gnl|danRer3|chr24 (28609060-28608877) | |
| 204-374, gnl|dasNov1|scaffold_39683 (8326-8162) | |
| 204-374, gnl|dasNov1|scaffold_39683 (8153-8344) | |
| 204-374, gnl|echTel1|scaffold_314007 (34783-34592) | |
| 204-374, gnl|echTel1|scaffold_37673 (3903-3741) | |
| 204-374, gnl|fr1|chrUn (171811616-171811416) | |
| 204-374, gnl|galGal2|chrZ (6728834-6728670) | |
| 204-374, gnl|galGal2|chrZ (6728661-6728845) | |
| 204-374, gnl|hg17|chr1 (236462602-236462766) | |
| 204-374, gnl|hg17|chr5 (43332855-43333046) | |
| 204-374, gnl|Hg17|chr5 (43333027-43332857) | |
| 204-374, gnl|loxAfr1|scaffold_17838 (7064-7228) | |
| 204-374, gnl|loxAfr1|scaffold_17838 (7237-7046) | |
| 204-374, gnl|mm7|chr13_random (486603-486793) | |
| 204-374, gnl|Mm7|chr13_random (486775-486605) | |
| 204-374, gnl|mm7|chrUn_random (9364534-9364373) | |
| 204-374, gnl|monDom2|scaffold_20 (27427136-27427300) | |
| 204-374, gnl|monDom2|scaffold_20 (27427309-27427123) | |
| 204-374, gnl|oryCun1|scaffold_214099 (54146-53993) | |
| 204-374, gnl|oryCun1|scaffold_31238 (3267-3076) | |
| 204-374, gnl|panTro1|chr1 (220433849-220434013) | |
| 204-374, gnl|panTro1|chr4 (73192181-73191990) | |
| 204-374, gnl|rheMac2|chr1 (217077487-217077323) | |
| 204-374, gnl|rheMac2|chr6 (43249471-43249662) | |
| 204-374, gnl|rn3|chr2 (51675758-51675919) | |
| 204-374, gnl|rn3|chr2 (51675928-51675738) | |
| 204-374, gnl|tetNig1|chrUn_random (111214552-111214711) | |
| 204-374, gnl|tetNig1|chrUn_random (111214719-111214547) | |
| 204-374, gnl|xenTro1|scaffold_938 (80513-80349) | |
| 204-374, gnl|xenTro1|scaffold_938 (80340-80531) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 204-374, gnl|bosTau2|chr20 (18802395-18802565) | |
| 204-374, gnl|canFam2|chr4 (69845487-69845651) | |
| 204-374, gnl|canFam2|chr4 (69845660-69845469) | |
| 204-374, gnl|danRer3|chr24 (28608885-28609048) | |
| 204-374, gnl|danRer3|chr24 (28609060-28608877) | |
| 204-374, gnl|dasNov1|scaffold_39683 (8326-8162) | |
| 204-374, gnl|dasNov1|scaffold_39683 (8153-8344) | |
| 204-374, gnl|echTel1|scaffold_314007 (34783-34592) | |
| 204-374, gnl|echTel1|scaffold_37673 (3903-3741) | |
| 204-374, gnl|fr1|chrUn (171811616-171811416) | |
| 204-374, gnl|galGal2|chrZ (6728834-6728670) | |
| 204-374, gnl|galGal2|chrZ (6728661-6728845) | |
| 204-374, gnl|hg17|chr1 (236462602-236462766) | |
| 204-374, gnl|hg17|chr5 (43332855-43333046) | |
| 204-374, gnl|Hg17|chr5 (43333027-43332857) | |
| 204-374, gnl|loxAfr1|scaffold_17838 (7064-7228) | |
| 204-374, gnl|loxAfr1|scaffold_17838 (7237-7046) | |
| 204-374, gnl|mm7|chr13_random (486603-486793) | |
| 204-374, gnl|Mm7|chr13_random (486775-486605) | |
| 204-374, gnl|mm7|chrUn_random (9364534-9364373) | |
| 204-374, gnl|monDom2|scaffold_20 (27427136-27427300) | |
| 204-374, gnl|monDom2|scaffold_20 (27427309-27427123) | |
| 204-374, gnl|oryCun1|scaffold_214099 (54146-53993) | |
| 204-374, gnl|oryCun1|scaffold_31238 (3267-3076) | |
| 204-374, gnl|panTro1|chr1 (220433849-220434013) | |
| 204-374, gnl|panTro1|chr4 (73192181-73191990) | |
| 204-374, gnl|rheMac2|chr1 (217077487-217077323) | |
| 204-374, gnl|rheMac2|chr6 (43249471-43249662) | |
| 204-374, gnl|rn3|chr2 (51675758-51675919) | |
| 204-374, gnl|rn3|chr2 (51675928-51675738) | |
| 204-374, gnl|tetNig1|chrUn_random (111214552-111214711) | |
| 204-374, gnl|tetNig1|chrUn_random (111214719-111214547) | |
| 204-374, gnl|xenTro1|scaffold_938 (80513-80349) | |
| 204-374, gnl|xenTro1|scaffold_938 (80340-80531) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cli (0.152812) |