Ss1.1-rcli14b_c6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCGGGGCGGGTGAGTCCCTGCCTCTCGGCGAGAGGAGCCTCAGAGCGGCCCCCGGGCAAG GGGGTGCCCGGAAGAAGGTCGAGAAACTGCAGAGGGGGGACAATCCGGGAGCTCTCGGTA ACCTAACCCCTCACCCGTCACGTGATCACGCTGGGCGGAAAGAGGCAACGTGAAGCCCCC CCAGACGCCCGGACAGGAGCACGGATGCTGCCCCAACCTGGGATCTATTACTTTCCCTGG GAAGTTAGTGCCGGCCACGTTCCTGATGGGAACACACTGAGAACTTTTGGCAGGTTGTGC AGCTACGACCTGACCCAGTCCCGAGTGACCCTGATGGCTCAGCACCGGTCTGACCAGCAC CGGATCCTCGTCTGTACCAAGTTGGTGGAACCGTTCCAGGCCCAGGTCGGCTCCCTCTAC ACTGTGCTGGGGGAGCTGGAGCGCCAGGAGGGTGGAGGCTCCGTGGTGAAGGCCCGGGTA CTGACTTGCGTGGAAGGAATGAATCTACCTCTGTTAGAACAAGCCATCCGGGAGCAGAGG CAGTACCTGCAAGAGAGGGACGGAGGCCAGTAGGGAAAAAAAAAAGCGGGGGGCAGCTCC TGGCAAGACTGCGATCTGGCTGTGCTGCGGAGAAGATGCAGAAGCTTCCCTGGAGAGACG ACCTTTTCTGGGGCCGGAGAGAAGAGAGGCGGGGTTGCTAATCGGAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCGGGGCGGGTGAGTCCCTGCCTCTCGGCGAGAGGAGCCTCAGAGCGGCCCCCGGGCAAG GGGGTGCCCGGAAGAAGGTCGAGAAACTGCAGAGGGGGGACAATCCGGGAGCTCTCGGTA ACCTAACCCCTCACCCGTCACGTGATCACGCTGGGCGGAAAGAGGCAACGTGAAGCCCCC CCAGACGCCCGGACAGGAGCACGGATGCTGCCCCAACCTGGGATCTATTACTTTCCCTGG GAAGTTAGTGCCGGCCACGTTCCTGATGGGAACACACTGAGAACTTTTGGCAGGTTGTGC AGCTACGACCTGACCCAGTCCCGAGTGACCCTGATGGCTCAGCACCGGTCTGACCAGCAC CGGATCCTCGTCTGTACCAAGTTGGTGGAACCGTTCCAGGCCCAGGTCGGCTCCCTCTAC ACTGTGCTGGGGGAGCTGGAGCGCCAGGAGGGTGGAGGCTCCGTGGTGAAGGCCCGGGTA CTGACTTGCGTGGAAGGAATGAATCTACCTCTGTTAGAACAAGCCATCCGGGAGCAGAGG CAGTACCTGCAAGAGAGGGACGGAGGCCAGTAGGGAAAAAAAAAAGCGGGGGGCAGCTCC TGGCAAGACTGCGATCTGGCTGTGCTGCGGAGAAGATGCAGAAGCTTCCCTGGAGAGACG ACCTTTTCTGGGGCCGGAGAGAAGAGAGGCGGGGTTGCTAATCGGAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 290-453, gnl|bosTau2|chr19 (49585472-49585309) | |
| 290-453, gnl|canFam2|chr9 (7642497-7642323) | |
| 290-453, gnl|canFam2|chr9 (7642467-7642312) | |
| 290-453, gnl|dasNov1|scaffold_66461 (9195-9366) | |
| 290-453, gnl|dasNov1|scaffold_66461 (9222-9381) | |
| 290-453, gnl|fr1|chrUn (300995316-300995140) | |
| 290-453, gnl|galGal2|chr18 (4390376-4390228) | |
| 290-453, gnl|hg17|chr17 (71499110-71499284) | |
| 290-453, gnl|Hg17|chr17 (71499138-71499301) | |
| 290-453, gnl|hg17|chr9 (81332864-81333028) | |
| 290-453, gnl|loxAfr1|scaffold_67100 (5142-5306) | |
| 290-453, gnl|loxAfr1|scaffold_8912 (100124-100266) | |
| 290-453, gnl|mm7|chr11 (116314624-116314798) | |
| 290-453, gnl|mm7|chr11 (116314654-116314800) | |
| 290-453, gnl|Mm7|chr11 (116314652-116314815) | |
| 290-453, gnl|monDom2|scaffold_18 (33831517-33831691) | |
| 290-453, gnl|oryCun1|scaffold_113526 (3743-3569) | |
| 290-453, gnl|oryCun1|scaffold_113526 (3713-3557) | |
| 290-453, gnl|panTro1|chr11 (65259113-65259277) | |
| 290-453, gnl|panTro1|chr16 (87146500-87146326) | |
| 290-453, gnl|rheMac2|chr15 (90252029-90252188) | |
| 290-453, gnl|rheMac2|chr16 (71319136-71319310) | |
| 290-453, gnl|rn3|chr10 (106333782-106333956) | |
| 290-453, gnl|rn3|chr10 (106333812-106333958) | |
| 290-453, gnl|tetNig1|chrUn_random (27233267-27233111) | |
| 454-671, gnl|bosTau2|chr19 (49577415-49577189) | |
| 454-671, gnl|canFam2|chr9 (7633576-7633393) | |
| 454-671, gnl|dasNov1|scaffold_85258 (2662-2486) | |
| 454-671, gnl|echTel1|scaffold_135581 (697-880) | |
| 454-671, gnl|Hg17|chr17 (71507819-71508044) | |
| 454-671, gnl|hg17|chr9 (81333029-81333197) | |
| 454-671, gnl|loxAfr1|scaffold_8912 (100267-100423) | |
| 454-671, gnl|mm7|chr11 (116323887-116324041) | |
| 454-671, gnl|Mm7|chr11 (116323886-116324182) | |
| 454-671, gnl|oryCun1|scaffold_182088 (16491-16315) | |
| 454-671, gnl|panTro1|chr11 (65259278-65259446) | |
| 454-671, gnl|rheMac2|chr15 (90252189-90252357) | |
| 454-671, gnl|rn3|chr10 (106341913-106342067) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 290-453, gnl|bosTau2|chr19 (49585472-49585309) | |
| 290-453, gnl|canFam2|chr9 (7642497-7642323) | |
| 290-453, gnl|canFam2|chr9 (7642467-7642312) | |
| 290-453, gnl|dasNov1|scaffold_66461 (9195-9366) | |
| 290-453, gnl|dasNov1|scaffold_66461 (9222-9381) | |
| 290-453, gnl|fr1|chrUn (300995316-300995140) | |
| 290-453, gnl|galGal2|chr18 (4390376-4390228) | |
| 290-453, gnl|hg17|chr17 (71499110-71499284) | |
| 290-453, gnl|Hg17|chr17 (71499138-71499301) | |
| 290-453, gnl|hg17|chr9 (81332864-81333028) | |
| 290-453, gnl|loxAfr1|scaffold_67100 (5142-5306) | |
| 290-453, gnl|loxAfr1|scaffold_8912 (100124-100266) | |
| 290-453, gnl|mm7|chr11 (116314624-116314798) | |
| 290-453, gnl|mm7|chr11 (116314654-116314800) | |
| 290-453, gnl|Mm7|chr11 (116314652-116314815) | |
| 290-453, gnl|monDom2|scaffold_18 (33831517-33831691) | |
| 290-453, gnl|oryCun1|scaffold_113526 (3743-3569) | |
| 290-453, gnl|oryCun1|scaffold_113526 (3713-3557) | |
| 290-453, gnl|panTro1|chr11 (65259113-65259277) | |
| 290-453, gnl|panTro1|chr16 (87146500-87146326) | |
| 290-453, gnl|rheMac2|chr15 (90252029-90252188) | |
| 290-453, gnl|rheMac2|chr16 (71319136-71319310) | |
| 290-453, gnl|rn3|chr10 (106333782-106333956) | |
| 290-453, gnl|rn3|chr10 (106333812-106333958) | |
| 290-453, gnl|tetNig1|chrUn_random (27233267-27233111) | |
| 454-671, gnl|bosTau2|chr19 (49577415-49577189) | |
| 454-671, gnl|canFam2|chr9 (7633576-7633393) | |
| 454-671, gnl|dasNov1|scaffold_85258 (2662-2486) | |
| 454-671, gnl|echTel1|scaffold_135581 (697-880) | |
| 454-671, gnl|Hg17|chr17 (71507819-71508044) | |
| 454-671, gnl|hg17|chr9 (81333029-81333197) | |
| 454-671, gnl|loxAfr1|scaffold_8912 (100267-100423) | |
| 454-671, gnl|mm7|chr11 (116323887-116324041) | |
| 454-671, gnl|Mm7|chr11 (116323886-116324182) | |
| 454-671, gnl|oryCun1|scaffold_182088 (16491-16315) | |
| 454-671, gnl|panTro1|chr11 (65259278-65259446) | |
| 454-671, gnl|rheMac2|chr15 (90252189-90252357) | |
| 454-671, gnl|rn3|chr10 (106341913-106342067) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| cli (0.152812) | |
| cov (0.132153) |