Ss1.1-rcli14b_e22.5
|
GGACCAGTGAATCCGCGTTGCTCTCTGCTTGGTCTCACCTGCCTCCACTCATGGACCCCA
ACTGCTCCTGCCCCACAGGTGGTTCCTGCAGCTGCGCAGGCTCCTGCACATGCAAAGCCT
GCAGATGCACCTCCTGCAAGAAGAGCTGCTGCTCCTGCTGCCCCGCGGGCTGTGCCAAGT
GTGCCCAGGGCTGCATCTGCAAAGGAGCCTCGGACAAGTGCAGCTGCTGTGCCTGATGTC
GGGGAGACCCTGCCCCAGAAATCAATAGAGCAACATAGACAAACCTCATTTTAATATTTT
TCATACAAGCTGACCTCATGCTACATCCCTTTTTCTATGAAATATGTGAGTTGTAATAAA
TGTTGTCGATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGACCAGTGAATCCGCGTTGCTCTCTGCTTGGTCTCACCTGCCTCCACTCATGGACCCCA
ACTGCTCCTGCCCCACAGGTGGTTCCTGCAGCTGCGCAGGCTCCTGCACATGCAAAGCCT
GCAGATGCACCTCCTGCAAGAAGAGCTGCTGCTCCTGCTGCCCCGCGGGCTGTGCCAAGT
GTGCCCAGGGCTGCATCTGCAAAGGAGCCTCGGACAAGTGCAGCTGCTGTGCCTGATGTC
GGGGAGACCCTGCCCCAGAAATCAATAGAGCAACATAGACAAACCTCATTTTAATATTTT
TCATACAAGCTGACCTCATGCTACATCCCTTTTTCTATGAAATATGTGAGTTGTAATAAA
TGTTGTCGATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-388, gnl|bosTau2|chr8 (5530393-5530002) |
|
1-388, gnl|Hg17|chr1 (16313255-16312864) |
|
1-388, gnl|Mm7|chr12 (5586909-5587250) |
| |
|
51-381, gnl|bosTau2|chr10 (21392986-21392654) |
|
51-381, gnl|canFam2|chr12 (49320631-49320350) |
|
51-381, gnl|dasNov1|scaffold_45545 (4105-4335) |
|
51-381, gnl|echTel1|scaffold_277080 (37857-38090) |
|
51-381, gnl|Hg17|chr1 (16313199-16312871) |
|
51-381, gnl|hg17|chr9 (1237108-1237301) |
|
51-381, gnl|loxAfr1|scaffold_197749 (729-499) |
|
51-381, gnl|mm7|chr12 (5587220-5587000) |
|
51-381, gnl|Mm7|chr12 (5586922-5587243) |
|
51-381, gnl|oryCun1|scaffold_109111 (7872-7662) |
|
51-381, gnl|panTro1|chr2 (10029591-10029821) |
|
51-381, gnl|rheMac2|chr15 (75974843-75974651) |
|
51-381, gnl|rn3|chrX (55341880-55342104) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-388, gnl|bosTau2|chr8 (5530393-5530002) |
|
1-388, gnl|Hg17|chr1 (16313255-16312864) |
|
1-388, gnl|Mm7|chr12 (5586909-5587250) |
| |
|
51-381, gnl|bosTau2|chr10 (21392986-21392654) |
|
51-381, gnl|canFam2|chr12 (49320631-49320350) |
|
51-381, gnl|dasNov1|scaffold_45545 (4105-4335) |
|
51-381, gnl|echTel1|scaffold_277080 (37857-38090) |
|
51-381, gnl|Hg17|chr1 (16313199-16312871) |
|
51-381, gnl|hg17|chr9 (1237108-1237301) |
|
51-381, gnl|loxAfr1|scaffold_197749 (729-499) |
|
51-381, gnl|mm7|chr12 (5587220-5587000) |
|
51-381, gnl|Mm7|chr12 (5586922-5587243) |
|
51-381, gnl|oryCun1|scaffold_109111 (7872-7662) |
|
51-381, gnl|panTro1|chr2 (10029591-10029821) |
|
51-381, gnl|rheMac2|chr15 (75974843-75974651) |
|
51-381, gnl|rn3|chrX (55341880-55342104) |
|
cli (13.2946) |
|
fli (5.68067) |
|
eli (5.00987) |
|
elu (0.385356) |
|
jej (0.197844) |
|
ton (0.1755) |
|
nje (0.16592) |
|
ute (0.132784) |
|
cov (0.132153) |
|
kid (0.129735) |
|
cli (13.2946) |
|
fli (5.68067) |
|
eli (5.00987) |
|
elu (0.385356) |
|
jej (0.197844) |
|
ton (0.1755) |
|
nje (0.16592) |
|
ute (0.132784) |
|
cov (0.132153) |
|
kid (0.129735) |
