Non-Coding RNA Search

Ss1.1-rcli15b_e16.5

Sequence:


               
               TGCGGCTGCTACGCTCGGGCGGCCCTGGGGCCCTTGGGGCCACCTCCTCCCACGTGGCAC
CCGGCTTCCAGGAGAGCCGCTTCCGGCGCCAGCTGGCCCTGCTCACCTGGACGCTGCAGG
GGGCGGCCAACGCGCTGAGTGGGGACGTCTGGAATATCGATAACAACTTCTGAGGCCGGT
GGAGGGGGGCACGTGCCCCTGACCCCTGCCGAAAACGCCTGCTTTCCACCCTTGAGTGAT
TTCTGGGTGATGGAGACCCCCTTGTGCACCTCCGGTTGCTGACCGACCGTTTTCTCCTTA
GTCGTTAAGGTACCTCCAAGGGACCCAGCAATGATGCCAGAGCAGACACCCACACACCCC
AGGCCCTGCAATGTAGGAGGTGGTGAGCAGCGCCTTTCATAATGGGCCATACTGTCAATT
AATCAGAGAGCAGCATCCTCTCCCTCACTCATAGCCCCTTCCTCTTCAGGAGTGAGATCC
CCCATCCCCCTCGCCACAGCTAGAGACTTCTGGAAGGTTTCCTAGTCCCTGGGACCTGGC
CAGGCCTTTTGGTGGGAGAGATCGCTGGGACCATAGCCTTATGGCCGCCAACACGTAGCC
TGTGGTAGGAGTGGCTGGGGTTTGGAGCTCAATAAACCACCTCGTGGCATCTGTTGTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCGGCTGCTACGCTCGGGCGGCCCTGGGGCCCTTGGGGCCACCTCCTCCCACGTGGCAC
CCGGCTTCCAGGAGAGCCGCTTCCGGCGCCAGCTGGCCCTGCTCACCTGGACGCTGCAGG
GGGCGGCCAACGCGCTGAGTGGGGACGTCTGGAATATCGATAACAACTTCTGAGGCCGGT
GGAGGGGGGCACGTGCCCCTGACCCCTGCCGAAAACGCCTGCTTTCCACCCTTGAGTGAT
TTCTGGGTGATGGAGACCCCCTTGTGCACCTCCGGTTGCTGACCGACCGTTTTCTCCTTA
GTCGTTAAGGTACCTCCAAGGGACCCAGCAATGATGCCAGAGCAGACACCCACACACCCC
AGGCCCTGCAATGTAGGAGGTGGTGAGCAGCGCCTTTCATAATGGGCCATACTGTCAATT
AATCAGAGAGCAGCATCCTCTCCCTCACTCATAGCCCCTTCCTCTTCAGGAGTGAGATCC
CCCATCCCCCTCGCCACAGCTAGAGACTTCTGGAAGGTTTCCTAGTCCCTGGGACCTGGC
CAGGCCTTTTGGTGGGAGAGATCGCTGGGACCATAGCCTTATGGCCGCCAACACGTAGCC
TGTGGTAGGAGTGGCTGGGGTTTGGAGCTCAATAAACCACCTCGTGGCATCTGTTGTTTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               22-660, gnl|bosTau2|chr25 (32354823-32355462)
               

               
               22-660, gnl|Hg17|chr7 (99863282-99862669)
               

               
               22-660, gnl|Mm7|chr5 (136505215-136505742)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-660, gnl|bosTau2|chr25 (32354823-32355462)
               

               
               22-660, gnl|Hg17|chr7 (99863282-99862669)
               

               
               22-660, gnl|Mm7|chr5 (136505215-136505742)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cli (0.764059)
               

               
               fcc (0.197785)
               

               
               fhi (0.169578)
               

               
               nbm (0.0993246)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.764059)
               

               
               fcc (0.197785)
               

               
               fhi (0.169578)
               

               
               nbm (0.0993246)

	22-660, gnl\|bosTau2\|chr25 (32354823-32355462)
	22-660, gnl\|Hg17\|chr7 (99863282-99862669)
	22-660, gnl\|Mm7\|chr5 (136505215-136505742)