Ss1.1-rcli16b_n21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGACATTCAGCCAGCCAGTCGCAGCGACGGACTTTCACTCCTAGAACCATGGCCCAGTTG GTCCGTAACCTCGCGGAGAAGGCACCGGTCTGGGTTAACGCTGCTGTGACTTACTCGAAG CCTCGATGGGCCACATTTGGGCACTATGCCAAGGTGGAGCTGGTTCCTCCAACCCCTGCT GAGATCCCTACAGCTATTCAGAGCCTGAAAAAAATAGTCAATAGTGCTCAAACTGGTAGC TTCAAACAGCTCACAGTTAAGGAAGCTCTGCTGAATGGTTGGGTGGCCACCGAGGTGTTG ATGTGGTTTTATGTCGGCGAGATCATAGGCAAGCGTGGCATCATGGGCTATGATGTTTAA AGACCAATCTTTTAACATGTCATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGACATTCAGCCAGCCAGTCGCAGCGACGGACTTTCACTCCTAGAACCATGGCCCAGTTG GTCCGTAACCTCGCGGAGAAGGCACCGGTCTGGGTTAACGCTGCTGTGACTTACTCGAAG CCTCGATGGGCCACATTTGGGCACTATGCCAAGGTGGAGCTGGTTCCTCCAACCCCTGCT GAGATCCCTACAGCTATTCAGAGCCTGAAAAAAATAGTCAATAGTGCTCAAACTGGTAGC TTCAAACAGCTCACAGTTAAGGAAGCTCTGCTGAATGGTTGGGTGGCCACCGAGGTGTTG ATGTGGTTTTATGTCGGCGAGATCATAGGCAAGCGTGGCATCATGGGCTATGATGTTTAA AGACCAATCTTTTAACATGTCATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-384, gnl|bosTau2|chr8 (32646271-32646642) | |
| 1-384, gnl|Hg17|chr22 (41360826-41360445) | |
| 1-384, gnl|Mm7|chr5 (23622400-23622024) | |
| 5-380, gnl|bosTau2|chr19 (50761776-50762137) | |
| 5-380, gnl|Hg17|chr22 (41360822-41360449) | |
| 5-380, gnl|Mm7|chrUn_random (4985844-4985471) | |
| 100-270, gnl|bosTau2|chr15 (15120035-15119865) | |
| 100-270, gnl|canFam2|chr5 (18337556-18337376) | |
| 100-270, gnl|danRer3|chr5 (24859508-24859327) | |
| 100-270, gnl|dasNov1|scaffold_279267 (938-1119) | |
| 100-270, gnl|echTel1|scaffold_17175 (2745-2564) | |
| 100-270, gnl|fr1|chrUn (260979798-260979630) | |
| 100-270, gnl|galGal2|chr24 (4273644-4273464) | |
| 100-270, gnl|hg17|chr11 (117782859-117783040) | |
| 100-270, gnl|Hg17|chr11 (117782861-117783031) | |
| 100-270, gnl|loxAfr1|scaffold_36980 (17289-17108) | |
| 100-270, gnl|mm7|chr9 (44849161-44848980) | |
| 100-270, gnl|Mm7|chr9 (44849157-44848987) | |
| 100-270, gnl|monDom2|scaffold_2 (120285614-120285433) | |
| 100-270, gnl|oryCun1|scaffold_196550 (5382-5201) | |
| 100-270, gnl|panTro1|chr9 (119790531-119790712) | |
| 100-270, gnl|rheMac2|chr14 (116788382-116788563) | |
| 100-270, gnl|rn3|chr8 (47880422-47880244) | |
| 100-270, gnl|tetNig1|chr7 (1600558-1600724) | |
| 100-270, gnl|xenTro1|scaffold_18 (530768-530589) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-384, gnl|bosTau2|chr8 (32646271-32646642) | |
| 1-384, gnl|Hg17|chr22 (41360826-41360445) | |
| 1-384, gnl|Mm7|chr5 (23622400-23622024) | |
| 5-380, gnl|bosTau2|chr19 (50761776-50762137) | |
| 5-380, gnl|Hg17|chr22 (41360822-41360449) | |
| 5-380, gnl|Mm7|chrUn_random (4985844-4985471) | |
| 100-270, gnl|bosTau2|chr15 (15120035-15119865) | |
| 100-270, gnl|canFam2|chr5 (18337556-18337376) | |
| 100-270, gnl|danRer3|chr5 (24859508-24859327) | |
| 100-270, gnl|dasNov1|scaffold_279267 (938-1119) | |
| 100-270, gnl|echTel1|scaffold_17175 (2745-2564) | |
| 100-270, gnl|fr1|chrUn (260979798-260979630) | |
| 100-270, gnl|galGal2|chr24 (4273644-4273464) | |
| 100-270, gnl|hg17|chr11 (117782859-117783040) | |
| 100-270, gnl|Hg17|chr11 (117782861-117783031) | |
| 100-270, gnl|loxAfr1|scaffold_36980 (17289-17108) | |
| 100-270, gnl|mm7|chr9 (44849161-44848980) | |
| 100-270, gnl|Mm7|chr9 (44849157-44848987) | |
| 100-270, gnl|monDom2|scaffold_2 (120285614-120285433) | |
| 100-270, gnl|oryCun1|scaffold_196550 (5382-5201) | |
| 100-270, gnl|panTro1|chr9 (119790531-119790712) | |
| 100-270, gnl|rheMac2|chr14 (116788382-116788563) | |
| 100-270, gnl|rn3|chr8 (47880422-47880244) | |
| 100-270, gnl|tetNig1|chr7 (1600558-1600724) | |
| 100-270, gnl|xenTro1|scaffold_18 (530768-530589) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| med (0.232504) | |
| nep (0.183925) | |
| sto (0.179824) | |
| cli (0.152812) | |
| nca (0.136874) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.232504) | |
| nep (0.183925) | |
| sto (0.179824) | |
| cli (0.152812) | |
| nca (0.136874) |