Non-Coding RNA Search

Ss1.1-rcli20b_i14.5

Sequence:


               
               AGGAGAAGTCTGAAGAGGGGCTACTCTCTGGGGACACAGGCAAGCATCATCCTGGGGCAG
GAGCAAGATGCATTTGCTGGGGGCTTTGAGAAGAACCAGTGTTTGGTGGGAGACATTGGA
GATGTGAACATGTGGGACTATGTGTTGTCACCGGAGGAGATTAACACTGTCTATGCTGGT
GGGACCTTCAGTCCTAATGTCCTTAACTGGAGGGCGCTGAGGTATGAAATGAGTGGCGAG
GTGTATGTCAAGCCCCAGCTGTGGCCCTGAGGCCTTTTTGTGAATCCCAAAGGTGCCTCC
TGGGGTTACACCTTACGTTCCCCTTGTCTCTGGCTCTGATGTTTTACACACACTGCAAGC
CAGCTCTGTGAACACAGGCTCTCACATCCCTGCTCTACCCTCCTCAGTGCCAGAGAGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGAAGTCTGAAGAGGGGCTACTCTCTGGGGACACAGGCAAGCATCATCCTGGGGCAG
GAGCAAGATGCATTTGCTGGGGGCTTTGAGAAGAACCAGTGTTTGGTGGGAGACATTGGA
GATGTGAACATGTGGGACTATGTGTTGTCACCGGAGGAGATTAACACTGTCTATGCTGGT
GGGACCTTCAGTCCTAATGTCCTTAACTGGAGGGCGCTGAGGTATGAAATGAGTGGCGAG
GTGTATGTCAAGCCCCAGCTGTGGCCCTGAGGCCTTTTTGTGAATCCCAAAGGTGCCTCC
TGGGGTTACACCTTACGTTCCCCTTGTCTCTGGCTCTGATGTTTTACACACACTGCAAGC
CAGCTCTGTGAACACAGGCTCTCACATCCCTGCTCTACCCTCCTCAGTGCCAGAGAGGGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-223, gnl|bosTau2|chr3 (5447796-5448018)
               

               
               1-223, gnl|Hg17|chr1 (156488137-156487898)
               

               
               1-223, gnl|Mm7|chr1 (172668931-172669153)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-223, gnl|bosTau2|chr3 (5447796-5448018)
               

               
               1-223, gnl|Hg17|chr1 (156488137-156487898)
               

               
               1-223, gnl|Mm7|chr1 (172668931-172669153)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               cli (0.458435)
               

               
               eli (0.151814)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.458435)
               

               
               eli (0.151814)

	1-223, gnl\|bosTau2\|chr3 (5447796-5448018)
	1-223, gnl\|Hg17\|chr1 (156488137-156487898)
	1-223, gnl\|Mm7\|chr1 (172668931-172669153)