Non-Coding RNA Search

Ss1.1-rcli24b_j20.5

Sequence:


               
               TAGAGGTTGGAGATGGATTTCGCTTGTGCCGTCTGTGCACGTTTTAGAATTGAAGGGAAA
CCACGATGCTATTTCCACAAGTTTGTGTCCGTTAGCCTTGGGTCCTTCATTCTCATTTAG
GATTAAGTTTTTCTGAAAACACGACCTGTCGCATGTGTGTTCAGCCTTTTTTATAAGATA
GTAACAGCATGAACTTCCAAGATAGGTAATGACACTGGGCTCATTTGTTTCTTTGCTTTA
TTTAGGCAAGGAGAGGAATGAGTCATTGAGGAAAACCTGAGCCTCCAGTTGTGAAATACA
CACATTGACCAGGATCCAGGTGGCAGTGAAGCCAGAAGAGTGTGGCGATGCCCTGTAACG
TAGCACAGTTTACCCAGCATGACTTTCCTTAGGAGGTCCCCTCACATGCTAGAGCAGAAG
TCCCAACTAACCGAACCTGTTAGAAGAGCCAACGGAAGAGAGCTTTACAGCTTCTGTCCC
TGACGGGGGCCTAAGGTCAAAGCTATGGATGGGAACAGTTGCGGGGGAGGGAGGTGGGGG
GGGGGTTGGGGGGGCTTTCCTTAATTTATCTTCATGTCCAGTGAGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGAGGTTGGAGATGGATTTCGCTTGTGCCGTCTGTGCACGTTTTAGAATTGAAGGGAAA
CCACGATGCTATTTCCACAAGTTTGTGTCCGTTAGCCTTGGGTCCTTCATTCTCATTTAG
GATTAAGTTTTTCTGAAAACACGACCTGTCGCATGTGTGTTCAGCCTTTTTTATAAGATA
GTAACAGCATGAACTTCCAAGATAGGTAATGACACTGGGCTCATTTGTTTCTTTGCTTTA
TTTAGGCAAGGAGAGGAATGAGTCATTGAGGAAAACCTGAGCCTCCAGTTGTGAAATACA
CACATTGACCAGGATCCAGGTGGCAGTGAAGCCAGAAGAGTGTGGCGATGCCCTGTAACG
TAGCACAGTTTACCCAGCATGACTTTCCTTAGGAGGTCCCCTCACATGCTAGAGCAGAAG
TCCCAACTAACCGAACCTGTTAGAAGAGCCAACGGAAGAGAGCTTTACAGCTTCTGTCCC
TGACGGGGGCCTAAGGTCAAAGCTATGGATGGGAACAGTTGCGGGGGAGGGAGGTGGGGG
GGGGGTTGGGGGGGCTTTCCTTAATTTATCTTCATGTCCAGTGAGCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-280, gnl|bosTau2|chr25 (31351897-31352165)
               

               
               11-280, gnl|Hg17|chr7 (75602227-75601946)
               

               
               11-280, gnl|Mm7|chr5 (134880970-134880725)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-280, gnl|bosTau2|chr25 (31351897-31352165)
               

               
               11-280, gnl|Hg17|chr7 (75602227-75601946)
               

               
               11-280, gnl|Mm7|chr5 (134880970-134880725)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ton (0.1755)
               

               
               cli (0.152812)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)
               

               
               cli (0.152812)
               

               
               ese (0.126502)

	11-280, gnl\|bosTau2\|chr25 (31351897-31352165)
	11-280, gnl\|Hg17\|chr7 (75602227-75601946)
	11-280, gnl\|Mm7\|chr5 (134880970-134880725)